RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 KLK14Q9P0G3 267 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 NUP188Q5SRE5 1749 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 FAM237BA0A1B0GVD1 139 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SRRM3A6NNA2 597 aaPredicted RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 CXCL8P10145 99 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SKIV2LQ15477 1246 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 C4orf50Q6ZRC1 276 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 RNF135Q8IUD6 432 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 ZCCHC9Q8N567 271 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 CHST13Q8NET6 341 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 DDX50Q9BQ39 737 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 MECRQ9BV79 373 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SMARCAD1Q9H4L7 1026 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 ZFATQ9P243 1243 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 RIPK3Q9Y572 518 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 TRIM17Q9Y577 477 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 A8MXQ7 604 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 LIASO43766 372 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 GPC4O75487 556 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 MUTP22033 750 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PTPN4P29074 926 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SOX11P35716 441 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 GARSP41250 739 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 AP2B1P63010 937 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SURF1Q15526 300 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 C16orf46Q6P387 395 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 CES3Q6UWW8 571 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 OTOAQ7RTW8 1153 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 METTL23Q86XA0 190 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 EXT2Q93063 718 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 UNKQ9C0B0 810 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 TLK1Q9UKI8 766 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 FCHO1O14526 889 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 AIM2O14862 343 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ABCG1P45844 678 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 RPL10AP62906 217 aaKnown RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 NOMO3P69849 1222 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SEPT6Q14141 434 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 MPP2Q14168 576 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 TRIP10Q15642 601 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 C15orf59Q2T9L4 293 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 LACTB2Q53H82 288 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 TMCO4Q5TGY1 634 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 PIGWQ7Z7B1 504 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 TRABD2AQ86V40 505 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SPATA24Q86W54 205 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ZDHHC14Q8IZN3 488 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 FGD4Q96M96 766 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 A1CFQ9NQ94 594 aaKnown RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 KRT36O76013 467 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 CST3P01034 146 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 VTNP04004 478 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 CRADDP78560 199 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 HIC1Q14526 733 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SLC30A9Q6PML9 568 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 BZW1Q7L1Q6 419 aaKnown RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 RYBPQ8N488 228 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 MIPOL1Q8TD10 442 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SLITRK1Q96PX8 696 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 APOL2Q9BQE5 337 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 FOXP3Q9BZS1 431 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ANLNQ9NQW6 1124 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 USP18Q9UMW8 372 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 PRG3Q9Y2Y8 225 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 MROH7Q68CQ1 1323 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 SRCAPQ6ZRS2 3230 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 CALB2P22676 271 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ADORA2AP29274 412 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 VHLP40337 213 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 RFC5P40937 340 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 ART3Q13508 389 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 DENND1BQ6P3S1 775 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 STK32AQ8WU08 396 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 RXFP2Q8WXD0 754 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 CGRRF1Q99675 332 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 RNPEPL1Q9HAU8 725 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 AVENQ9NQS1 362 aaPredicted RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 MTO1Q9Y2Z2 717 aaKnown RBP10.78□□□□□ -0.68
CTCFL-216ENST00000608263 MYH3P11055 1940 aa10.78□□□□□ -0.68
CTCFL-216ENST00000608263 PABPN1LA6NDY0 278 aaKnown RBP10.77□□□□□ -0.68
CTCFL-216ENST00000608263 MGRN1O60291 552 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 FAM155BO75949 473 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 GLRA2P23416 452 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 RPL22P35268 128 aaKnown RBP10.77□□□□□ -0.68
CTCFL-216ENST00000608263 FCGRTP55899 365 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.68
CTCFL-216ENST00000608263 BTKQ06187 659 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 TXNRD3NBQ6F5E7 133 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 RFWD2Q8NHY2 731 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 JOSD2Q8TAC2 188 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 COPS5Q92905 334 aa10.77□□□□□ -0.68
CTCFL-216ENST00000608263 ALKBH8Q96BT7 664 aaKnown RBP10.77□□□□□ -0.68
CTCFL-216ENST00000608263 MBOAT7Q96N66 472 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms