RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ADAM28Q9UKQ2 775 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 RAD51CO43502 376 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 CDR1P51861 262 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 CCDC14Q49A88 953 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 EFHC1Q5JVL4 640 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 ZFYVE27Q5T4F4 411 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 TXNRD3NBQ6F5E7 133 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.64■■□□□ 1.22
USP6NL-204ENST00000606752 ZDHHC14Q8IZN3 488 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 PRELID2Q8N945 189 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 CCDC26Q8TAB7 109 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 CSNK1G1Q9HCP0 422 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 FAN1Q9Y2M0 1017 aa22.64■■□□□ 1.22
USP6NL-204ENST00000606752 KIAA0100Q14667 2235 aaKnown RBP22.64■■□□□ 1.21
USP6NL-204ENST00000606752 TCRBV7S2A1N4TA0A589 114 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 SYN3O14994 580 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 ERLIN1O75477 346 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 RARAP10276 462 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 SDC4P31431 198 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 ADIGQ0VDE8 80 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
USP6NL-204ENST00000606752 MAATS1Q7Z4T9 603 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 LRRTM3Q86VH5 581 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 HNRNPLLQ8WVV9 542 aaKnown RBP22.64■■□□□ 1.21
USP6NL-204ENST00000606752 TMEM175Q9BSA9 504 aa22.64■■□□□ 1.21
USP6NL-204ENST00000606752 ZMYND10O75800 440 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 TIMP1P01033 207 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 KRT1P04264 644 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 DESP17661 470 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 MIPP30301 263 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 SLC11A1P49279 550 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 COPS2P61201 443 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 SIX1Q15475 284 aaPredicted RBP22.63■■□□□ 1.21
USP6NL-204ENST00000606752 ODF2Q5BJF6 829 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 TMCO3Q6UWJ1 677 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 ZMIZ2Q8NF64 920 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 RNF25Q96BH1 459 aaPredicted RBP22.63■■□□□ 1.21
USP6NL-204ENST00000606752 CFAP57Q96MR6 1250 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 TMEM209Q96SK2 561 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 KCNK16Q96T55 309 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 NCAPGQ9BPX3 1015 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 OSBPL8Q9BZF1 889 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 TMLHEQ9NVH6 421 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 AMACRQ9UHK6 382 aa22.63■■□□□ 1.21
USP6NL-204ENST00000606752 PHF2O75151 1096 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 GLI1P08151 1106 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 RALAP11233 206 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 IL1R2P27930 398 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 MRPS5P82675 430 aaKnown RBP22.62■■□□□ 1.21
USP6NL-204ENST00000606752 ADCY1Q08828 1119 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 LLGL1Q15334 1064 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 CYP1B1Q16678 543 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 C15orf59Q2T9L4 293 aaPredicted RBP22.62■■□□□ 1.21
USP6NL-204ENST00000606752 CCNI2Q6ZMN8 369 aaPredicted RBP22.62■■□□□ 1.21
USP6NL-204ENST00000606752 SIX6OS1Q8N1H7 587 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 MAGOHBQ96A72 148 aaKnown RBP22.62■■□□□ 1.21
USP6NL-204ENST00000606752 SLITRK1Q96PX8 696 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 ARFGAP3Q9NP61 516 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 USP18Q9UMW8 372 aa22.62■■□□□ 1.21
USP6NL-204ENST00000606752 ABHD14A-ACY1A0A1B0GW23 586 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 FBXO21O94952 628 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HEXIM1O94992 359 aaKnown RBP22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TRUB2O95900 331 aaKnown RBP22.61■■□□□ 1.21
USP6NL-204ENST00000606752 GALTP07902 379 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 CHRNA3P32297 505 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 PTPN9P43378 593 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TKTL1P51854 596 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 CACNA2D1P54289 1103 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 RAB41Q5JT25 222 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 SH3PXD2AQ5TCZ1 1133 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 LRRC43Q8N309 656 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HINFPQ9BQA5 517 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 ZWILCHQ9H900 591 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TMEM30AQ9NV96 361 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 KLHL11Q9NVR0 708 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.61■■□□□ 1.21
USP6NL-204ENST00000606752 PCSK1NQ9UHG2 260 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TSC2P49815 1807 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TRIM43BA6NCK2 446 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 PI4K2BG5E9Z4 385 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 KIAA0355O15063 1070 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HSF2BPO75031 334 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 UPP2O95045 317 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 BDNFP23560 247 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 NDUFV1P49821 464 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 ATP11AP98196 1134 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 IFT20Q8IY31 132 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 RAPGEF5Q92565 580 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 TRIM43Q96BQ3 446 aaPredicted RBP22.61■■□□□ 1.21
USP6NL-204ENST00000606752 DDX23Q9BUQ8 820 aaKnown RBP22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HEMGNQ9BXL5 484 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 MARCH5Q9NX47 278 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HCSTQ9UBK5 93 aa22.61■■□□□ 1.21
USP6NL-204ENST00000606752 HHLA1C9JL84 531 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 ITGB8P26012 769 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 BCAR1P56945 870 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 GUCY2DQ02846 1103 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 KLF1Q13351 362 aaPredicted RBP22.6■■□□□ 1.21
USP6NL-204ENST00000606752 FAM171A1Q5VUB5 890 aa22.6■■□□□ 1.21
USP6NL-204ENST00000606752 MFSD7Q6UXD7 560 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms