RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 EPB41P11171 864 aaKnown RBP27.65■■■□□ 2.02
PNKP-216ENST00000601816 TRIM21P19474 475 aaKnown RBP27.65■■■□□ 2.02
PNKP-216ENST00000601816 YWHAQP27348 245 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 GTF2H1P32780 548 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 CXCL12P48061 93 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 CCINQ13939 588 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 Q6ZS52 159 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 FUKQ8N0W3 1084 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 CRYBG2Q8N1P7 616 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 EEF2KMTQ96G04 330 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 KCNK16Q96T55 309 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 TSG101Q99816 390 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 NIF3L1Q9GZT8 377 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 KRT82Q9NSB4 513 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 PCDHA5Q9Y5H7 936 aa27.65■■■□□ 2.02
PNKP-216ENST00000601816 AP1G2O75843 785 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 CCDC130P13994 396 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 SATB1Q01826 763 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 COBLL1Q53SF7 1204 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 SYNPOQ8N3V7 929 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 PDZD8Q8NEN9 1154 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 SPATA20Q8TB22 786 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 ERCC4Q92889 916 aaPredicted RBP27.64■■■□□ 2.02
PNKP-216ENST00000601816 ATP2A3Q93084 1043 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 FBXO32Q969P5 355 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 GTPBP4Q9BZE4 634 aaKnown RBP27.64■■■□□ 2.02
PNKP-216ENST00000601816 CYP3A43Q9HB55 503 aa27.64■■■□□ 2.02
PNKP-216ENST00000601816 APOBEC3GQ9HC16 384 aaKnown RBP27.64■■■□□ 2.02
PNKP-216ENST00000601816 RIF1Q5UIP0 2472 aaKnown RBP27.64■■■□□ 2.01
PNKP-216ENST00000601816 TDGF1P13385 188 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 NRLP54845 237 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 SLC7A9P82251 487 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 INCA1Q0VD86 236 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 GRSF1Q12849 480 aaKnown RBP eCLIP27.63■■■□□ 2.01
PNKP-216ENST00000601816 TMEM196Q5HYL7 178 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 KRT39Q6A163 491 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 SLC2A14Q8TDB8 520 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 OVCA2Q8WZ82 227 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 ECT2Q9H8V3 914 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 FAM49BQ9NUQ9 324 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 FAM186AA6NE01 2351 aa27.63■■■□□ 2.01
PNKP-216ENST00000601816 PTPRZ1P23471 2315 aaPredicted RBP27.62■■■□□ 2.01
PNKP-216ENST00000601816 LEFTY2O00292 366 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 TRDMT1O14717 391 aaKnown RBP27.62■■■□□ 2.01
PNKP-216ENST00000601816 STX10O60499 249 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 LILRB5O75023 590 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 OLFM2O95897 454 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 OAS1P00973 400 aaKnown RBP27.62■■■□□ 2.01
PNKP-216ENST00000601816 MXI1P50539 228 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 SLC5A3P53794 718 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 MCCD1P59942 119 aaPredicted RBP27.62■■■□□ 2.01
PNKP-216ENST00000601816 EML3Q32P44 896 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 EXOC4Q96A65 974 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 CHFRQ96EP1 664 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 RNF38Q9H0F5 515 aa27.62■■■□□ 2.01
PNKP-216ENST00000601816 TNFRSF10BO14763 440 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 GJA4P35212 333 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 FSTL4Q6MZW2 842 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 C12orf29Q8N999 325 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 SUMF1Q8NBK3 374 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 SCAMP5Q8TAC9 235 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 SMOQ99835 787 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 HINFPQ9BQA5 517 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 NT5C1AQ9BXI3 368 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 COMMD8Q9NX08 183 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 CPQQ9Y646 472 aa27.61■■■□□ 2.01
PNKP-216ENST00000601816 HELZP42694 1942 aaKnown RBP27.61■■■□□ 2.01
PNKP-216ENST00000601816 CD58P19256 250 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 ZXDBP98169 803 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 FKBP3Q00688 224 aaKnown RBP27.6■■■□□ 2.01
PNKP-216ENST00000601816 NR1H3Q13133 447 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 TWNKQ96RR1 684 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 DNAI2Q9GZS0 605 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 SMPD4Q9NXE4 827 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 IL37Q9NZH6 218 aa27.6■■■□□ 2.01
PNKP-216ENST00000601816 SLC16A3O15427 465 aaKnown RBP27.59■■■□□ 2.01
PNKP-216ENST00000601816 PAPSS2O95340 614 aaPredicted RBP27.59■■■□□ 2.01
PNKP-216ENST00000601816 FAM200BP0CF97 657 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 ADORA2BP29275 332 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 MAP3K7CLP57077 242 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 LRRC63Q05C16 580 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 ANKRD40Q6AI12 368 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 ZC3H3Q8IXZ2 948 aaKnown RBP27.59■■■□□ 2.01
PNKP-216ENST00000601816 FBXL13Q8NEE6 735 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 ZMIZ2Q8NF64 920 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 RUBCNQ92622 972 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 P2RY13Q9BPV8 354 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 EPC1Q9H2F5 836 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 CSNK1G1Q9HCP0 422 aa27.59■■■□□ 2.01
PNKP-216ENST00000601816 CILPO75339 1184 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 BEST1O76090 585 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 NFATC1O95644 943 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 MBL2P11226 248 aaPredicted RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 PMS1P54277 932 aaKnown RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 STIM1Q13586 685 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 DCAF17Q5H9S7 520 aaPredicted RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 TCERG1LQ5VWI1 586 aa27.58■■■□□ 2.01
PNKP-216ENST00000601816 DDX42Q86XP3 938 aaKnown RBP eCLIP27.58■■■□□ 2.01
PNKP-216ENST00000601816 ELOA2Q8IYF1 753 aaPredicted RBP27.58■■■□□ 2.01
PNKP-216ENST00000601816 KIAA1958Q8N8K9 716 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms