RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ATP8B3O60423 1300 aa24.07■■□□□ 1.44
SSBP4-209ENST00000601357 K7ESF4 209 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 TNFRSF10BO14763 440 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 CLSTN1O94985 981 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 GCLMP48507 274 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 SLC7A9P82251 487 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 EML3Q32P44 896 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 ACOT1Q86TX2 421 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 UNC93AQ86WB7 457 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 SMYD4Q8IYR2 804 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-209ENST00000601357 ATP2A3Q93084 1043 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 SMARCD1Q96GM5 515 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 RNF38Q9H0F5 515 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 ECT2Q9H8V3 914 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 IL37Q9NZH6 218 aa24.06■■□□□ 1.44
SSBP4-209ENST00000601357 RTN3O95197 1032 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-209ENST00000601357 GJA4P35212 333 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 NDST1P52848 882 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 AMPD2Q01433 879 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 INCA1Q0VD86 236 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 COBLL1Q53SF7 1204 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 CPA6Q8N4T0 437 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 KIAA1958Q8N8K9 716 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 SPATA20Q8TB22 786 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 TAS1R2Q8TE23 839 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 OVCA2Q8WZ82 227 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 SLITRK1Q96PX8 696 aa24.05■■□□□ 1.44
SSBP4-209ENST00000601357 APOBEC3GQ9HC16 384 aaKnown RBP24.05■■□□□ 1.44
SSBP4-209ENST00000601357 FBRSL1Q9HCM7 1045 aaKnown RBP24.05■■□□□ 1.44
SSBP4-209ENST00000601357 DMAP1Q9NPF5 467 aaPredicted RBP24.05■■□□□ 1.44
SSBP4-209ENST00000601357 EP300Q09472 2414 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-209ENST00000601357 LEFTY2O00292 366 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 KRT13P13646 458 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 YWHAQP27348 245 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 IFNAR2P48551 515 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 GRSF1Q12849 480 aaKnown RBP eCLIP24.04■■□□□ 1.44
SSBP4-209ENST00000601357 ORC1Q13415 861 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 NAIF1Q69YI7 327 aaPredicted RBP24.04■■□□□ 1.44
SSBP4-209ENST00000601357 ZMIZ2Q8NF64 920 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 GSDMAQ96QA5 445 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 MED10Q9BTT4 135 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 CSNK1G1Q9HCP0 422 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 KRT82Q9NSB4 513 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 RMND1Q9NWS8 449 aa24.04■■□□□ 1.44
SSBP4-209ENST00000601357 SMG5Q9UPR3 1016 aaKnown RBP24.04■■□□□ 1.44
SSBP4-209ENST00000601357 KIAA1549LQ6ZVL6 1849 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 FAM92AA1XBS5 289 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 CCDC130P13994 396 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 HOXA6P31267 233 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 GTF2H1P32780 548 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 PRCPP42785 496 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 SLC5A3P53794 718 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 DMWDQ09019 674 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 SNX30Q5VWJ9 437 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 DCLK2Q8N568 766 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 TTC16Q8NEE8 873 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 PDZD8Q8NEN9 1154 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 SCAMP5Q8TAC9 235 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 SMOQ99835 787 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 IMPG2Q9BZV3 1241 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 LINC00597Q9H2U6 94 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 TMEM8AQ9HCN3 771 aa24.03■■□□□ 1.44
SSBP4-209ENST00000601357 GOLGA6L4A6NEF3 574 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 AP1G2O75843 785 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 BEST1O76090 585 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 GALK1P51570 392 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 IFRD2Q12894 506 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-209ENST00000601357 ZNF658Q5TYW1 1059 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-209ENST00000601357 PKN3Q6P5Z2 889 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 C12orf29Q8N999 325 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 SLC2A14Q8TDB8 520 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 EEF2KMTQ96G04 330 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 TIGD1Q96MW7 591 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 TWNKQ96RR1 684 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 P2RY13Q9BPV8 354 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 NIF3L1Q9GZT8 377 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 CYP3A43Q9HB55 503 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 COMMD8Q9NX08 183 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 CPQQ9Y646 472 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 GPR179Q6PRD1 2367 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 MYO16Q9Y6X6 1858 aa24.02■■□□□ 1.44
SSBP4-209ENST00000601357 SPTBN4Q9H254 2564 aa24.01■■□□□ 1.43
SSBP4-209ENST00000601357 ABL1P00519 1130 aa24.01■■□□□ 1.43
SSBP4-209ENST00000601357 EGFP01133 1207 aa24.01■■□□□ 1.43
SSBP4-209ENST00000601357 DRD1P21728 446 aa24.01■■□□□ 1.43
SSBP4-209ENST00000601357 ZC3H3Q8IXZ2 948 aaKnown RBP24.01■■□□□ 1.43
SSBP4-209ENST00000601357 EZH1Q92800 747 aaPredicted RBP24.01■■□□□ 1.43
SSBP4-209ENST00000601357 FBXO32Q969P5 355 aa24.01■■□□□ 1.43
SSBP4-209ENST00000601357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.01■■□□□ 1.435e-8■■■■■ 144.6
SSBP4-209ENST00000601357 CHURC1-FNTBB4DL54 471 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 ZDHHC11BP0C7U3 371 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 HOXC13P31276 330 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 FNTBP49356 437 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 KRT39Q6A163 491 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 KIAA2013Q8IYS2 634 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 WHAMMQ8TF30 809 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 ZFRQ96KR1 1074 aaKnown RBP24■■□□□ 1.43
SSBP4-209ENST00000601357 HNRNPABQ99729 332 aaKnown RBP24■■□□□ 1.43
SSBP4-209ENST00000601357 HINFPQ9BQA5 517 aa24■■□□□ 1.43
SSBP4-209ENST00000601357 MMRN2Q9H8L6 949 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms