RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 KIF9Q9HAQ2 790 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 DMAP1Q9NPF5 467 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 TDP1Q9NUW8 608 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 DMXL1Q9Y485 3027 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 MYOFQ9NZM1 2061 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 C2orf78A6NCI8 922 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 STK25O00506 426 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 GALR2O43603 387 aaPredicted RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 AP1G2O75843 785 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 RTN3O95197 1032 aaPredicted RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 FGFR1OPO95684 399 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 AFPP02771 609 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 TBXAS1P24557 533 aaPredicted RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 PTPN5P54829 565 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 TAF10Q12962 218 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 ORC1Q13415 861 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 MLF2Q15773 248 aaPredicted RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGAP15Q53QZ3 475 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 CDKAL1Q5VV42 579 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 GPRIN1Q7Z2K8 1008 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 TTC30AQ86WT1 665 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 SCN4BQ8IWT1 228 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 CELF5Q8N6W0 485 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 PJA1Q8NG27 643 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 SCAMP5Q8TAC9 235 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 ENOX1Q8TC92 643 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 JAKMIP2Q96AA8 810 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 TMEM176AQ96HP8 235 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 SHDQ96IW2 340 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 CYP2S1Q96SQ9 504 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 DUSP16Q9BY84 665 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 RNF38Q9H0F5 515 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 IRF2BPLQ9H1B7 796 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 HSD3B7Q9H2F3 369 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 MMRN2Q9H8L6 949 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 TBC1D17Q9HA65 648 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 KRT82Q9NSB4 513 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 EHD2Q9NZN4 543 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGAP26Q9UNA1 814 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
SSBP4-208ENST00000600628 LAMA1P25391 3075 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 ATP8B3O60423 1300 aa9.31□□□□□ -0.92
SSBP4-208ENST00000600628 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 KANSL1LA0AUZ9 987 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 OTOL1A6NHN0 477 aaPredicted RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 LRRC10BA6NIK2 292 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 RNF225M0QZC1 329 aaPredicted RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 O00370 1275 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 GREM1O60565 184 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 GABBR2O75899 941 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 PAEPP09466 180 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC192P0DO97 292 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 ANXA13P27216 316 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 YWHAQP27348 245 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 GDI1P31150 447 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 RPS9P46781 194 aaKnown RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 RPL34P49207 117 aaKnown RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SLC5A3P53794 718 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 GRM2Q14416 872 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 TAF12Q16514 161 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 MEA1Q16626 185 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGAP29Q52LW3 1261 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 BHLHA9Q7RTU4 235 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC186Q7Z3E2 898 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC105Q8IYK2 499 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SCML4Q8N228 414 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 ANKRD52Q8NB46 1076 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 BPIFB1Q8TDL5 484 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 MRPS31Q92665 395 aaKnown RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 KAT5Q92993 513 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 MSANTD3Q96H12 275 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SLITRK6Q9H5Y7 841 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SIX2Q9NPC8 291 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 HPS4Q9NQG7 708 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 HEBP1Q9NRV9 189 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 FAM49BQ9NUQ9 324 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 TRPM5Q9NZQ8 1165 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 TMEM63CQ9P1W3 806 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 KIAA1257Q9ULG3 409 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 MAGED2Q9UNF1 606 aaPredicted RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SCML2Q9UQR0 700 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 SIT1Q9Y3P8 196 aa9.3□□□□□ -0.92
SSBP4-208ENST00000600628 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 ZFHX2Q9C0A1 2572 aaPredicted RBP9.3□□□□□ -0.92
SSBP4-208ENST00000600628 H0Y858 1186 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 MBD3O95983 291 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
SSBP4-208ENST00000600628 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
SSBP4-208ENST00000600628 CD58P19256 250 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms