RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PTPRJQ12913 1337 aa19.45■□□□□ 0.7
ARHGEF1-221ENST00000600387 A0A1B0GVG6 124 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 KBTBD13C9JR72 458 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 BRD2P25440 801 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 PTGER2P43116 358 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 NLRP11P59045 1033 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 DPYSL3Q14195 570 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 LRRC23Q53EV4 343 aaPredicted RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 IGDCC3Q8IVU1 814 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 ACAP3Q96P50 834 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 STK32BQ9NY57 414 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 SORCS3Q9UPU3 1222 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 TEX264Q9Y6I9 313 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 STYXL1Q9Y6J8 313 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 BUD23O43709 281 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 DGAT1O75907 488 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 KRT37O76014 449 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 SERPINA6P08185 405 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 ACOT2P49753 483 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 YWHAGP61981 247 aaKnown RBP eCLIP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 TAZQ16635 292 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 HADHQ16836 314 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 LGSNQ5TDP6 509 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 CRLF3Q8IUI8 442 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 UNC45BQ8IWX7 931 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 STKLD1Q8NE28 680 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 CLPTM1LQ96KA5 538 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 NDNQ99608 321 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 MAP3K20Q9NYL2 800 aaKnown RBP19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 PPM1HQ9ULR3 514 aa19.44■□□□□ 0.7
ARHGEF1-221ENST00000600387 KAT6AQ92794 2004 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 TRIM49D1C9J1S8 452 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 SNRPAP09012 282 aaKnown RBP19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 SLC25A11Q02978 314 aaKnown RBP19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 MTM1Q13496 603 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 NME8Q8N427 588 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 TAB3Q8N5C8 712 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 FAM81AQ8TBF8 368 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 OPTNQ96CV9 577 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 MIS12Q9H081 205 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 MKS1Q9NXB0 559 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 RBAKQ9NYW8 714 aaPredicted RBP19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 SIRPGQ9P1W8 387 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 ZNF180Q9UJW8 692 aa19.43■□□□□ 0.7
ARHGEF1-221ENST00000600387 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 DKC1O60832 514 aaKnown RBP eCLIP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 WEE2P0C1S8 567 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PIM1P11309 404 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 KDELR1P24390 212 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 CAP2P40123 477 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 CBLBQ13191 982 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PGM5Q15124 567 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 ANGEL2Q5VTE6 544 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 CDHR3Q6ZTQ4 885 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PDSS2Q86YH6 399 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 UBR7Q8N806 425 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 OR6Y1Q8NGX8 325 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 SYTL5Q8TDW5 730 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 CGRRF1Q99675 332 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 ZCWPW1Q9H0M4 648 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 S100A14Q9HCY8 104 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PDLIM7Q9NR12 457 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 SOX13Q9UN79 622 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PCDHA10Q9Y5I2 948 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 RNASEH1O60930 286 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 STAM2O75886 525 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 LDHAP00338 332 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 EIF2AK2P19525 551 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 PSMA2P25787 234 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 AQP5P55064 265 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 EIF3EP60228 445 aaKnown RBP19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 XIAPP98170 497 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 HIC1Q14526 733 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 MDH1BQ5I0G3 518 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 CFAP157Q5JU67 520 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 FAM71DQ8N9W8 422 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 FAM172AQ8WUF8 416 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 MASTLQ96GX5 879 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 IMPG2Q9BZV3 1241 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 EBF3Q9H4W6 596 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 ZWILCHQ9H900 591 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 SLC9A2Q9UBY0 812 aa19.42■□□□□ 0.7
ARHGEF1-221ENST00000600387 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 APOC4-APOC2K7ER74 178 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 MCF2LO15068 1137 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 APOC2P02655 101 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 PABPC4LP0CB38 370 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 EIF4BP23588 611 aaKnown RBP19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 MAP3K10Q02779 954 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 ASPHQ12797 758 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 LSAMPQ13449 338 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 MED21Q13503 144 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 CHI3L2Q15782 390 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 SMTNL2Q2TAL5 461 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 TEX44Q53QW1 395 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 SLFN12LQ6IEE8 588 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 RAPH1Q70E73 1250 aa19.41■□□□□ 0.7
ARHGEF1-221ENST00000600387 DHDDSQ86SQ9 333 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms