RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 VEPH1Q14D04 833 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 PTPN20Q4JDL3 420 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 MICALL1Q8N3F8 863 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 STKLD1Q8NE28 680 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 TRMT2BQ96GJ1 504 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 CPXM1Q96SM3 734 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 S1PR5Q9H228 398 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 NHEJ1Q9H9Q4 299 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 PTPRDP23468 1912 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 CCL16O15467 120 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 XYLBO75191 536 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 ACADSBP45954 432 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 GABRB2P47870 512 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 EPHA5P54756 1037 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 PTP4A2Q12974 167 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 SLC18A3Q16572 532 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 PM20D1Q6GTS8 502 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 ACAD10Q6JQN1 1059 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 GPR149Q86SP6 731 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 PHF13Q86YI8 300 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 SCML4Q8N228 414 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 SCAMP5Q8TAC9 235 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 ZNF512Q96ME7 567 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 ISCUQ9H1K1 167 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 LRRC4Q9HBW1 653 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 TJP2Q9UDY2 1190 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
CHMP2A-206ENST00000600118 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 E5RJQ4 531 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 PAPSS1O43252 624 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 ERBB2P04626 1255 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 TKTL1P51854 596 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 GFPT1Q06210 699 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 PPP1R2P3Q6NXS1 205 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 TMC5Q6UXY8 1006 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 MON1BQ7L1V2 547 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 ST7Q9NRC1 585 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 EHD2Q9NZN4 543 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 SCML2Q9UQR0 700 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 NCANO14594 1321 aa13.32□□□□□ -0.28
CHMP2A-206ENST00000600118 SOWAHDA6NJG2 315 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ZNF263O14978 683 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 AKR1B10O60218 316 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 RTN2O75298 545 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 FBXO21O94952 628 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 LCA5LO95447 670 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ZBED1O96006 694 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ZDHHC11BP0C7U3 371 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 PTPN2P17706 415 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 YWHAQP27348 245 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ITIH3Q06033 890 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 TAF10Q12962 218 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 CCDC85BQ15834 202 aaPredicted RBP13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 RAD9BQ6WBX8 426 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
CHMP2A-206ENST00000600118 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms