RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ADORA2BP29275 332 aa14.98□□□□□ -0.01
LIG1-218ENST00000599322 PMS1P54277 932 aaKnown RBP14.98□□□□□ -0.01
LIG1-218ENST00000599322 MCCD1P59942 119 aaPredicted RBP14.98□□□□□ -0.01
LIG1-218ENST00000599322 ZC3H14Q6PJT7 736 aaKnown RBP14.98□□□□□ -0.01
LIG1-218ENST00000599322 DDX42Q86XP3 938 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIG1-218ENST00000599322 C1orf210Q8IVY1 113 aa14.98□□□□□ -0.01
LIG1-218ENST00000599322 CPA6Q8N4T0 437 aa14.98□□□□□ -0.01
LIG1-218ENST00000599322 ARL14EPQ8N8R7 260 aaPredicted RBP14.98□□□□□ -0.01
LIG1-218ENST00000599322 HNRNPABQ99729 332 aaKnown RBP14.98□□□□□ -0.01
LIG1-218ENST00000599322 IER2Q9BTL4 223 aa14.98□□□□□ -0.01
LIG1-218ENST00000599322 NME7Q9Y5B8 376 aa14.98□□□□□ -0.01
LIG1-218ENST00000599322 CACNA1IQ9P0X4 2223 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 ZNF840PA6NDX5 716 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 SLC9A3R1O14745 358 aaPredicted RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 P4HA2O15460 535 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 CILPO75339 1184 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 RPS9P46781 194 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 STX17P56962 302 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 MAP3K7CLP57077 242 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 ORC1Q13415 861 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 RUNX3Q13761 415 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 MTF1Q14872 753 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 ZNF394Q53GI3 561 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 HECTD3Q5T447 861 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 FUKQ8N0W3 1084 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 MLKLQ8NB16 471 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 RSPRY1Q96DX4 576 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 TMEM176AQ96HP8 235 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 NT5C1BQ96P26 610 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 CYP2S1Q96SQ9 504 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 KCNK16Q96T55 309 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 LMAN1LQ9HAT1 526 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 APOBEC3GQ9HC16 384 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 TLR8Q9NR97 1041 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 CISHQ9NSE2 258 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 DUS2Q9NX74 493 aaKnown RBP14.97□□□□□ -0.01
LIG1-218ENST00000599322 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 COQ4Q9Y3A0 265 aa14.97□□□□□ -0.01
LIG1-218ENST00000599322 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-218ENST00000599322 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 MBL2P11226 248 aaPredicted RBP14.96□□□□□ -0.01
LIG1-218ENST00000599322 TARSP26639 723 aaKnown RBP14.96□□□□□ -0.01
LIG1-218ENST00000599322 FMO5P49326 533 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 SLC5A3P53794 718 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 USP46P62068 366 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 GOLGA8FQ08AF8 430 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 GOLGA8DPQ0D2H9 430 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 CBWD6Q4V339 395 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 CBWD3Q5JTY5 395 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 DGKKQ5KSL6 1271 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 CBWD5Q5RIA9 395 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 TTI2Q6NXR4 508 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 TADA2BQ86TJ2 420 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 C12orf29Q8N999 325 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 TTC8Q8TAM2 541 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 SH3RF2Q8TEC5 729 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 SEMA4DQ92854 862 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 ATP2A3Q93084 1043 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 NKD2Q969F2 451 aaPredicted RBP14.96□□□□□ -0.01
LIG1-218ENST00000599322 SLC35C1Q96A29 364 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 NUP62CLQ9H1M0 184 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 GTSE1Q9NYZ3 720 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 HESX1Q9UBX0 185 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 CHORDC1Q9UHD1 332 aaPredicted RBP14.96□□□□□ -0.01
LIG1-218ENST00000599322 RWDD2AQ9UIY3 292 aa14.96□□□□□ -0.01
LIG1-218ENST00000599322 C2orf78A6NCI8 922 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 TADA3O75528 432 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 NFATC1O95644 943 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 AFPP02771 609 aaKnown RBP14.95□□□□□ -0.02
LIG1-218ENST00000599322 CTHP32929 405 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 GRSF1Q12849 480 aaKnown RBP eCLIP14.95□□□□□ -0.02
LIG1-218ENST00000599322 LRMPQ12912 555 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 CUL2Q13617 745 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 PAQR9Q6ZVX9 377 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 FAM114A1Q8IWE2 563 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 KIAA1958Q8N8K9 716 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 OSCP1Q8WVF1 389 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 JAKMIP2Q96AA8 810 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 CLDN23Q96B33 292 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 LRRC3BQ96PB8 259 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 DUSP9Q99956 384 aaKnown RBP14.95□□□□□ -0.02
LIG1-218ENST00000599322 FAM83CQ9BQN1 747 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 SEMA4AQ9H3S1 761 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 CLSTN2Q9H4D0 955 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 EBF3Q9H4W6 596 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 CSNK1G1Q9HCP0 422 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 GCNT4Q9P109 453 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 CCL26Q9Y258 94 aa14.95□□□□□ -0.02
LIG1-218ENST00000599322 MTF2Q9Y483 593 aaPredicted RBP14.95□□□□□ -0.02
LIG1-218ENST00000599322 NCANO14594 1321 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 ARNTLO00327 626 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 PMM2O15305 246 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 LRRN2O75325 713 aa14.94□□□□□ -0.02
LIG1-218ENST00000599322 CD19P15391 556 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms