RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TRIM66O15016 1216 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 NFATC1O95644 943 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 APBB3O95704 486 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 TCF3P15923 654 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 DGKEP52429 567 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 TNNC1P63316 161 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 NOP14P78316 857 aaKnown RBP17.13■□□□□ 0.33
LIM2-202ENST00000596399 AMPD3Q01432 767 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 NR1H3Q13133 447 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 STPG1Q5TH74 334 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 C12orf40Q86WS4 652 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 ADGRG2Q8IZP9 1017 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 KCNK16Q96T55 309 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 SMYD3Q9H7B4 428 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 ZDHHC4Q9NPG8 344 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 CHD8Q9HCK8 2581 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 ZFHX4Q86UP3 3567 aa17.13■□□□□ 0.33
LIM2-202ENST00000596399 TPRP12270 2363 aaKnown RBP17.13■□□□□ 0.33
LIM2-202ENST00000596399 AKAP3O75969 853 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 YEATS4O95619 227 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 OAS1P00973 400 aaKnown RBP17.12■□□□□ 0.33
LIM2-202ENST00000596399 HNRNPLP14866 589 aaKnown RBP eCLIP17.12■□□□□ 0.33
LIM2-202ENST00000596399 SLC7A9P82251 487 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 TRPC3Q13507 836 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 B3GALNT2Q8NCR0 500 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 CHORDC1Q9UHD1 332 aaPredicted RBP17.12■□□□□ 0.33
LIM2-202ENST00000596399 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
LIM2-202ENST00000596399 OLFM2O95897 454 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 BCKDHBP21953 392 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 GBP1P32455 592 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 CREB5Q02930 508 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 ORC1Q13415 861 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 DHCR24Q15392 516 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 N4BP2L1Q5TBK1 243 aaPredicted RBP17.11■□□□□ 0.33
LIM2-202ENST00000596399 EMC10Q5UCC4 262 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 TDRD10Q5VZ19 366 aaKnown RBP17.11■□□□□ 0.33
LIM2-202ENST00000596399 ANO7Q6IWH7 933 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 PAQR9Q6ZVX9 377 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 TTC30AQ86WT1 665 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 TSTD1Q8NFU3 115 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 EXOC4Q96A65 974 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 ACDQ96AP0 544 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 SDCBP2Q9H190 292 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 EBF1Q9UH73 591 aa17.11■□□□□ 0.33
LIM2-202ENST00000596399 FOXD2O60548 495 aaPredicted RBP17.1■□□□□ 0.33
LIM2-202ENST00000596399 EXOC3O60645 756 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 PHACTR2O75167 634 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 MBL2P11226 248 aaPredicted RBP17.1■□□□□ 0.33
LIM2-202ENST00000596399 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
LIM2-202ENST00000596399 PGFP49763 221 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 PDE6CP51160 858 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 LIMK1P53667 647 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 PKP1Q13835 747 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 KNOP1Q1ED39 458 aaKnown RBP17.1■□□□□ 0.33
LIM2-202ENST00000596399 BMT2Q1RMZ1 405 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 WBP2Q969T9 261 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 PCDHGA5Q9Y5G8 931 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 UBE4BO95155 1302 aa17.1■□□□□ 0.33
LIM2-202ENST00000596399 LRRIQ3A6PVS8 624 aaPredicted RBP17.09■□□□□ 0.33
LIM2-202ENST00000596399 COCHO43405 550 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 KLRC4O43908 158 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 CLSTN1O94985 981 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 VNN1O95497 513 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
LIM2-202ENST00000596399 YWHAQP27348 245 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 TIE1P35590 1138 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 ME1P48163 572 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 DLG4P78352 724 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 KDSRQ06136 332 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 BIRC3Q13489 604 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 ELF2Q15723 593 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 NUP93Q8N1F7 819 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 FRMD1Q8N878 549 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 MDGA1Q8NFP4 955 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 FBXO32Q969P5 355 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 ZFRQ96KR1 1074 aaKnown RBP17.09■□□□□ 0.33
LIM2-202ENST00000596399 CCSER2Q9H7U1 834 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 VPS45Q9NRW7 570 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 MMP17Q9ULZ9 603 aa17.09■□□□□ 0.33
LIM2-202ENST00000596399 ABCA7Q8IZY2 2146 aa17.08■□□□□ 0.33
LIM2-202ENST00000596399 MYOFQ9NZM1 2061 aa17.08■□□□□ 0.33
LIM2-202ENST00000596399 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
LIM2-202ENST00000596399 PATE3B3GLJ2 98 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 SGK1O00141 431 aa17.08■□□□□ 0.32
LIM2-202ENST00000596399 TNFRSF10BO14763 440 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms