RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 PSMC3P17980 439 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 AVPR1AP37288 418 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 SLC8A3P57103 927 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 GPC5P78333 572 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 PFKPQ01813 784 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 STILQ15468 1287 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 CNGA2Q16280 664 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 DPY19L2P1Q6NXN4 242 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 VITQ6UXI7 678 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 CELF5Q8N6W0 485 aaKnown RBP19.29■□□□□ 0.68
ZNF558-204ENST00000596172 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
ZNF558-204ENST00000596172 ANKRD20A12PQ8NF67 263 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 TRMT61BQ9BVS5 477 aaKnown RBP19.29■□□□□ 0.68
ZNF558-204ENST00000596172 HSD3B7Q9H2F3 369 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 SIX2Q9NPC8 291 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 TAB2Q9NYJ8 693 aa19.29■□□□□ 0.68
ZNF558-204ENST00000596172 SMTNL1A8MU46 457 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 ZDHHC11BP0C7U3 371 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 CD19P15391 556 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 KIF11P52732 1056 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 FCHO2Q0JRZ9 810 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 KCNMA1Q12791 1236 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 AOPEPQ8N6M6 819 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 FBXO32Q969P5 355 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 RSPRY1Q96DX4 576 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 KIF9Q9HAQ2 790 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 TRPV5Q9NQA5 729 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 TDP1Q9NUW8 608 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 HESX1Q9UBX0 185 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 TSPAN16Q9UKR8 245 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 SCML2Q9UQR0 700 aa19.28■□□□□ 0.68
ZNF558-204ENST00000596172 TRAV19A0A0A6YYK7 116 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 SYCE3A1L190 88 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
ZNF558-204ENST00000596172 DPYSL4O14531 572 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 PRAMEF12O95522 483 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 CAVIN2O95810 425 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 USP17L7P0C7H9 530 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 ZNF165P49910 485 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 BCAT1P54687 386 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 PKDCCQ504Y2 493 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 GJB7Q6PEY0 223 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 TTC30AQ86WT1 665 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 DHX40Q8IX18 779 aaKnown RBP19.27■□□□□ 0.68
ZNF558-204ENST00000596172 TFAP2BQ92481 460 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 SHC3Q92529 594 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 USP13Q92995 863 aaPredicted RBP19.27■□□□□ 0.68
ZNF558-204ENST00000596172 LRRC3BQ96PB8 259 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 LRFN3Q9BTN0 628 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 VPS16Q9H269 839 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 USP3Q9Y6I4 520 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 TECTAO75443 2155 aa19.27■□□□□ 0.68
ZNF558-204ENST00000596172 C2orf78A6NCI8 922 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 FAM86C2PA6NEL3 165 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 XPO1O14980 1071 aaKnown RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 CHADO15335 359 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 OLFM2O95897 454 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 OAS1P00973 400 aaKnown RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 CFHP08603 1231 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 TCF3P15923 654 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 HDCP19113 662 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 CDK11BP21127 795 aaKnown RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 RFX1P22670 979 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 TUBP50607 506 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 COPB1P53618 953 aaKnown RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 APBA1Q02410 837 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 BST2Q10589 180 aaKnown RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 MEA1Q16626 185 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 GOLGA7BQ2TAP0 167 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 RAB41Q5JT25 222 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 KLHDC7AQ5VTJ3 777 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 GPRIN1Q7Z2K8 1008 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 BPIFB1Q8TDL5 484 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 DNASE1L2Q92874 299 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 IRF7Q92985 503 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 SLC22A12Q96S37 553 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 CYP2S1Q96SQ9 504 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 ZSWIM1Q9BR11 485 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 PLCB1Q9NQ66 1216 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 CHORDC1Q9UHD1 332 aaPredicted RBP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 DNAJC12Q9UKB3 198 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 FBXL21Q9UKT6 434 aa19.26■□□□□ 0.67
ZNF558-204ENST00000596172 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.67
ZNF558-204ENST00000596172 GREB1Q4ZG55 1949 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 ZNF263O14978 683 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 SETSIPP0DME0 302 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 KRT5P13647 590 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 SLC7A9P82251 487 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 PDE4CQ08493 712 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 IFRD2Q12894 506 aaPredicted RBP19.25■□□□□ 0.67
ZNF558-204ENST00000596172 GRM2Q14416 872 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 ZSCAN23Q3MJ62 389 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 ARHGAP29Q52LW3 1261 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 FKBP15Q5T1M5 1219 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 HFE2Q6ZVN8 426 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 APTXQ7Z2E3 356 aaKnown RBP19.25■□□□□ 0.67
ZNF558-204ENST00000596172 CCDC186Q7Z3E2 898 aa19.25■□□□□ 0.67
ZNF558-204ENST00000596172 PIGZQ86VD9 579 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms