RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PLVAPQ9BX97 442 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 TLR10Q9BXR5 811 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 GOLPH3Q9H4A6 298 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 METTL5Q9NRN9 209 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 FNIP2Q9P278 1114 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 LCMT1Q9UIC8 334 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 ANAPC7Q9UJX3 599 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 LZTS1Q9Y250 596 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 WDR27A2RRH5 827 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CTAGE9A4FU28 777 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 C5orf67F2Z3F1 127 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 F8VP50 259 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 PIK3R2O00459 728 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 PROSCO94903 275 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 FBXO21O94952 628 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 FTCDO95954 541 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CTSAP10619 480 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 HAPLN1P10915 354 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 KRT3P12035 628 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 LCP1P13796 627 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CPB1P15086 417 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 MYOGP15173 224 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 RPL17P18621 184 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 MAN1A1P33908 653 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 RFC1P35251 1148 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ROR1Q01973 937 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 OGDHQ02218 1023 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ADIGQ0VDE8 80 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 MESDQ14696 234 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 FAM102AQ5T9C2 384 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 TRNP1Q6NT89 227 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ARCQ7LC44 396 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 DAAM2Q86T65 1068 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 SCUBE3Q8IX30 993 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ATAD1Q8NBU5 361 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ZNF592Q92610 1267 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 MCEEQ96PE7 176 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CRISPLD1Q9H336 500 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 LRRC4Q9HBW1 653 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CNGB3Q9NQW8 809 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ASNSD1Q9NWL6 643 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ABI2Q9NYB9 513 aaPredicted RBP15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 PCDHA11Q9Y5I1 949 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 ALG6Q9Y672 507 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 USP3Q9Y6I4 520 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 CHD9Q3L8U1 2897 aa15.5■□□□□ 0.07
SHKBP1-211ENST00000595945 MYO1FO00160 1098 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 ENC1O14682 589 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 TRIM66O15016 1216 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 NCK2O43639 380 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 ABLIM3O94929 683 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 OR1D2P34982 312 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 CTNNB1P35222 781 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 NDUFV1P49821 464 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 TKTL1P51854 596 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 ARPP19P56211 112 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 RAB33AQ14088 237 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 TPGS2Q68CL5 300 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 PM20D1Q6GTS8 502 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 DCUN1D2Q6PH85 259 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 BHLHA9Q7RTU4 235 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 CPNE8Q86YQ8 564 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 NIPA2Q8N8Q9 360 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 CLEC4CQ8WTT0 213 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 CD101Q93033 1021 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 HES6Q96HZ4 224 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 PGLYRP2Q96PD5 576 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 C17orf80Q9BSJ5 609 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 UBE2OQ9C0C9 1292 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 MRPL17Q9NRX2 175 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 AFF4Q9UHB7 1163 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
SHKBP1-211ENST00000595945 C2CD4BA6NLJ0 364 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 TMEM110-MUSTN1A8MSY1 372 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 H0YGN5 161 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 C2CD2LO14523 706 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 DPYSL4O14531 572 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 RB1P06400 928 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 GLI1P08151 1106 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 COMTP21964 271 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 GRIK1P39086 918 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SLC1A1P43005 524 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 DAOAP59103 153 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 MRPS5P82675 430 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 CREMQ03060 361 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 UBE3AQ05086 875 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 TAF5Q15542 800 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 PEX26Q7Z412 305 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SPRED2Q7Z698 418 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SIX6OS1Q8N1H7 587 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 TTC9BQ8N6N2 239 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SPPL3Q8TCT6 385 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 IRGQQ8WZA9 623 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SPATA17Q96L03 361 aa15.48■□□□□ 0.07
SHKBP1-211ENST00000595945 SAMD11Q96NU1 681 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms