RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PFKPQ01813 784 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 ENOSF1Q7L5Y1 443 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 GPRIN1Q7Z2K8 1008 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 SIX5Q8N196 739 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 RBBP8NLQ8NC74 664 aaPredicted RBP15.4■□□□□ 0.06
VRK3-206ENST00000594090 PDZD8Q8NEN9 1154 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 OVCA2Q8WZ82 227 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 USP13Q92995 863 aaPredicted RBP15.4■□□□□ 0.06
VRK3-206ENST00000594090 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 SLC22A12Q96S37 553 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 TRMT61BQ9BVS5 477 aaKnown RBP15.4■□□□□ 0.06
VRK3-206ENST00000594090 SMG9Q9H0W8 520 aaKnown RBP15.4■□□□□ 0.06
VRK3-206ENST00000594090 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
VRK3-206ENST00000594090 FANCLQ9NW38 375 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 TAB2Q9NYJ8 693 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 APEX2Q9UBZ4 518 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 CA14Q9ULX7 337 aa15.4■□□□□ 0.06
VRK3-206ENST00000594090 FAM92AA1XBS5 289 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 KRBA1A5PL33 1030 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 ZNF840PA6NDX5 716 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 RNF225M0QZC1 329 aaPredicted RBP15.39■□□□□ 0.05
VRK3-206ENST00000594090 PES1O00541 588 aaKnown RBP15.39■□□□□ 0.05
VRK3-206ENST00000594090 CKMP06732 381 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 GDI1P31150 447 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 APBA1Q02410 837 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 FCHO2Q0JRZ9 810 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 ZNF268Q14587 947 aaPredicted RBP15.39■□□□□ 0.05
VRK3-206ENST00000594090 GOLGA7BQ2TAP0 167 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 ANO6Q4KMQ2 910 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 GJB7Q6PEY0 223 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 TTC30AQ86WT1 665 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 ARL14EPQ8N8R7 260 aaPredicted RBP15.39■□□□□ 0.05
VRK3-206ENST00000594090 ANKRD52Q8NB46 1076 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 FAM81BQ96LP2 452 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 LRRC3BQ96PB8 259 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 FBXO44Q9H4M3 255 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 BRD9Q9H8M2 597 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 ARHGEF3Q9NR81 526 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 TSPAN16Q9UKR8 245 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 KIAA1257Q9ULG3 409 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
VRK3-206ENST00000594090 TICRRQ7Z2Z1 1910 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 O00370 1275 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 USP17L7P0C7H9 530 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 KRT5P13647 590 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 PFKLP17858 780 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 PDE6CP51160 858 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 BCAT1P54687 386 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 MFAP3P55082 362 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 NCAPHQ15003 741 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 IER5LQ5T953 404 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 YAF2Q8IY57 180 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 FBXL6Q8N531 539 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 CELF5Q8N6W0 485 aaKnown RBP15.38■□□□□ 0.05
VRK3-206ENST00000594090 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 TFAP2BQ92481 460 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 DNASE1L2Q92874 299 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 CYP2S1Q96SQ9 504 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 FUCA2Q9BTY2 467 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 NAT10Q9H0A0 1025 aaKnown RBP15.38■□□□□ 0.05
VRK3-206ENST00000594090 MFSD1Q9H3U5 465 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 TDP1Q9NUW8 608 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 GMIPQ9P107 970 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 HESX1Q9UBX0 185 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 CNTN6Q9UQ52 1028 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 COL4A3Q01955 1670 aa15.38■□□□□ 0.05
VRK3-206ENST00000594090 KMT2EQ8IZD2 1858 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 ARNTLO00327 626 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 ZNF263O14978 683 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 LETM1O95202 739 aaPredicted RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 ABL1P00519 1130 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 OAS1P00973 400 aaKnown RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 HDCP19113 662 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 BRD2P25440 801 aaKnown RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 SLC8A3P57103 927 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 KRT31Q15323 416 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 SNX30Q5VWJ9 437 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 CWF19L1Q69YN2 538 aaKnown RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 SUGP1Q8IWZ8 645 aaKnown RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 AOPEPQ8N6M6 819 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 RIN3Q8TB24 985 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 IRF7Q92985 503 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 TRPV5Q9NQA5 729 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 AJAP1Q9UKB5 411 aaPredicted RBP15.37■□□□□ 0.05
VRK3-206ENST00000594090 SCML2Q9UQR0 700 aa15.37■□□□□ 0.05
VRK3-206ENST00000594090 XPO1O14980 1071 aaKnown RBP15.36■□□□□ 0.05
VRK3-206ENST00000594090 CHADO15335 359 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 CYP26A1O43174 497 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 OLFM2O95897 454 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 CALCAP01258 141 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 TPM2P07951 284 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 ZDHHC11BP0C7U3 371 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 ZNF18P17022 549 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 KIF11P52732 1056 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 PDE4CQ08493 712 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 BST2Q10589 180 aaKnown RBP15.36■□□□□ 0.05
VRK3-206ENST00000594090 KCNMA1Q12791 1236 aa15.36■□□□□ 0.05
VRK3-206ENST00000594090 USP4Q13107 963 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms