RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 C10orf76Q5T2E6 689 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ATF7IP2Q5U623 682 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SFMBT2Q5VUG0 894 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PLA2G4FQ68DD2 849 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ZNF280DQ6N043 979 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 CEP85Q6P2H3 762 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SRGAP1Q7Z6B7 1085 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 C14orf80Q86SX3 495 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ZFAND4Q86XD8 727 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 HACE1Q8IYU2 909 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 MIER1Q8N108 512 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PHTF2Q8N3S3 785 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ARL14Q8N4G2 192 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 CCDC82Q8N4S0 544 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TMEM57Q8N5G2 664 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 NAT16Q8N8M0 369 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TEX19Q8NA77 164 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ZSCAN1Q8NBB4 408 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 RDH13Q8NBN7 331 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 RNF149Q8NC42 400 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 BEST2Q8NFU1 509 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SH3RF2Q8TEC5 729 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PRPF31Q8WWY3 499 aaKnown RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 HPS3Q969F9 1004 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 GPATCH3Q96I76 525 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 C5orf34Q96MH7 638 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SLC6A18Q96N87 628 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SMR3AQ99954 134 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SLC12A9Q9BXP2 914 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 MKRN2Q9H000 416 aaKnown RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 PRKRIP1Q9H875 184 aaPredicted RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 TRPC7Q9HCX4 862 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 NRBP2Q9NSY0 501 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 USP36Q9P275 1121 aaKnown RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 TJP2Q9UDY2 1190 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PHTF1Q9UMS5 762 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PCDHGA8Q9Y5G5 932 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PCDHA10Q9Y5I2 948 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TIMM13Q9Y5L4 95 aaPredicted RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 MYH10P35580 1976 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 RP1P56715 2156 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 MTMR11A4FU01 709 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TBC1D3BA6NDS4 549 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FAM86B1E9PN63 330 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 INO80B-WBP1J3KQ70 363 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 WNT9AO14904 365 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZBTB24O43167 697 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 TRAPPC3O43617 180 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CHMP2AO43633 222 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FSBPO95073 299 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 STBD1O95210 358 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FGF19O95750 216 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FGAP02671 866 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 F11P03951 625 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CKMP06732 381 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 ITGA2BP08514 1039 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FAM86B2P0C5J1 330 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 LIPCP11150 499 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 HGFP14210 728 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CD1EP15812 388 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ATP2B1P20020 1258 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ACSL1P33121 698 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CSTF2P33240 577 aaKnown RBP eCLIP3.34□□□□□ -1.87
VRK3-204ENST00000593912 GRIK1P39086 918 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 GRIA2P42262 883 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TNFRSF4P43489 277 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ART1P52961 327 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 NLRP12P59046 1061 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZXDBP98169 803 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 GRIN1Q05586 938 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FAM160A1Q05DH4 1040 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 LAMTOR4Q0VGL1 99 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TRAF1Q13077 416 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 DDX10Q13206 875 aaKnown RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZNF268Q14587 947 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 NOLC1Q14978 699 aaKnown RBP eCLIP3.34□□□□□ -1.87
VRK3-204ENST00000593912 DHCR24Q15392 516 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FUT11Q495W5 492 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 TMEM198Q66K66 360 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 HIST2H2BDQ6DRA6 164 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CENPPQ6IPU0 288 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 PADI6Q6TGC4 694 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CRTC1Q6UUV9 634 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 MFSD6Q6ZSS7 791 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 FILIP1Q7Z7B0 1213 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 PLA2G4DQ86XP0 818 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 PHC2Q8IXK0 858 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CHPFQ8IZ52 775 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ARL14EPQ8N8R7 260 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 LRRC15Q8TF66 581 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 ESR2Q92731 530 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 BIRC7Q96CA5 298 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 KIF1BPQ96EK5 621 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 CCDC51Q96ER9 411 aa3.34□□□□□ -1.87
VRK3-204ENST00000593912 HEXIM2Q96MH2 286 aaKnown RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 ZSCAN10Q96SZ4 725 aaPredicted RBP3.34□□□□□ -1.87
VRK3-204ENST00000593912 SEPT5Q99719 369 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms