RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PTPRDP23468 1912 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 LRRC10BA6NIK2 292 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 NOL4O94818 638 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 CEBPBP17676 345 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 ADORA2BP29275 332 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 MFAP3P55082 362 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 FKBP15Q5T1M5 1219 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 NPAS3Q8IXF0 933 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 STKLD1Q8NE28 680 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 TMEM30AQ9NV96 361 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 KIAA1257Q9ULG3 409 aa20.75■□□□□ 0.91
LSM4-203ENST00000593829 FAM200BP0CF97 657 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 GABRR2P28476 465 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 APBA1Q02410 837 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 DENND5BQ6ZUT9 1274 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 GAREM2Q75VX8 874 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 RNF135Q8IUD6 432 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 SHKBP1Q8TBC3 707 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 TRMT2BQ96GJ1 504 aaKnown RBP20.74■□□□□ 0.91
LSM4-203ENST00000593829 MYRFLQ96LU7 910 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 KCNK16Q96T55 309 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 UXTQ9UBK9 157 aaPredicted RBP20.74■□□□□ 0.91
LSM4-203ENST00000593829 LIMD1Q9UGP4 676 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 A0A1W2PRU2 124 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 MOSPD3O75425 235 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 PAEPP09466 180 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 CDC25CP30307 473 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 KCNMA1Q12791 1236 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 PPP1R26Q5T8A7 1209 aaPredicted RBP20.74■□□□□ 0.91
LSM4-203ENST00000593829 GJB7Q6PEY0 223 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 GPR161Q8N6U8 529 aaKnown RBP20.74■□□□□ 0.91
LSM4-203ENST00000593829 MCRS1Q96EZ8 462 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 GCNAQ96QF7 691 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 ATXN3LQ9H3M9 355 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 IL21Q9HBE4 155 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 CSNK1G1Q9HCP0 422 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 SIX2Q9NPC8 291 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 EHD2Q9NZN4 543 aa20.74■□□□□ 0.91
LSM4-203ENST00000593829 CD19P15391 556 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 GJA1P17302 382 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 TEAD2Q15562 447 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 SGO2Q562F6 1265 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 ARHGAP17Q68EM7 881 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 RBBP8NLQ8NC74 664 aaPredicted RBP20.73■□□□□ 0.91
LSM4-203ENST00000593829 SMOQ99835 787 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.73■□□□□ 0.91
LSM4-203ENST00000593829 CNTN6Q9UQ52 1028 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 PPP2R2CQ9Y2T4 447 aa20.73■□□□□ 0.91
LSM4-203ENST00000593829 NRG2O14511 850 aaPredicted RBP20.72■□□□□ 0.91
LSM4-203ENST00000593829 FANCGO15287 622 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 VDRP11473 427 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 KRT5P13647 590 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 MAP3K7CLP57077 242 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 TEX35Q5T0J7 233 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 GPR88Q9GZN0 384 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 LGALS16A8MUM7 142 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 RNF225M0QZC1 329 aaPredicted RBP20.72■□□□□ 0.91
LSM4-203ENST00000593829 BEST1O76090 585 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 URI1O94763 535 aaPredicted RBP20.72■□□□□ 0.91
LSM4-203ENST00000593829 ARHGAP44Q17R89 818 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 ARHGAP15Q53QZ3 475 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 DPY19L2P1Q6NXN4 242 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 APTXQ7Z2E3 356 aaKnown RBP20.72■□□□□ 0.91
LSM4-203ENST00000593829 NUP93Q8N1F7 819 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 DUSP16Q9BY84 665 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 ST7Q9NRC1 585 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 DNAJC12Q9UKB3 198 aa20.72■□□□□ 0.91
LSM4-203ENST00000593829 TNFRSF10AO00220 468 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 F11P03951 625 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 NPR3P17342 541 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 ZNF132P52740 706 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 KLHDC7AQ5VTJ3 777 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 SMYD5Q6GMV2 418 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 CLEC20AQ6ZU45 233 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 ZMIZ2Q8NF64 920 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 TTLL2Q9BWV7 592 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
LSM4-203ENST00000593829 CARD6Q9BX69 1037 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 SLITRK6Q9H5Y7 841 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 IGSF9Q9P2J2 1179 aa20.71■□□□□ 0.91
LSM4-203ENST00000593829 RTN3O95197 1032 aaPredicted RBP20.7■□□□□ 0.91
LSM4-203ENST00000593829 USP46P62068 366 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 UBXN1Q04323 297 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 RSRC2Q7L4I2 434 aaKnown RBP20.7■□□□□ 0.91
LSM4-203ENST00000593829 TMEM150AQ86TG1 271 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 NXPE3Q969Y0 559 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 KCNK12Q9HB15 430 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 PLCB1Q9NQ66 1216 aa20.7■□□□□ 0.91
LSM4-203ENST00000593829 DOCK8Q8NF50 2099 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 ANHXE9PGG2 379 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 TNFRSF10BO14763 440 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 RFX1P22670 979 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 SLC8A3P57103 927 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 POTEHQ6S545 545 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 MTSS1LQ765P7 747 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 ANKRD52Q8NB46 1076 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 SHC3Q92529 594 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 ZSWIM3Q96MP5 696 aa20.7■□□□□ 0.9
LSM4-203ENST00000593829 BAG1Q99933 345 aaPredicted RBP20.7■□□□□ 0.9
LSM4-203ENST00000593829 HESX1Q9UBX0 185 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms