RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MYL6P60660 151 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 TAF10Q12962 218 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 STK38Q15208 465 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 GRAMD1CQ8IYS0 662 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 PHTF2Q8N3S3 785 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 MDGA1Q8NFP4 955 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 MMS19Q96T76 1030 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 C7orf25Q9BPX7 421 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 BLZF1Q9H2G9 400 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 ZSCAN16Q9H4T2 348 aaPredicted RBP11.37□□□□□ -0.59
USE1-203ENST00000593597 ZDHHC4Q9NPG8 344 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 HCN2Q9UL51 889 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 PCDHGA5Q9Y5G8 931 aa11.37□□□□□ -0.59
USE1-203ENST00000593597 GON4LQ3T8J9 2241 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 BCLAF3A2AJT9 711 aaKnown RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 TNFRSF10BO14763 440 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 TRIM66O15016 1216 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 KLRC4O43908 158 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 VNN1O95497 513 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 NFATC1O95644 943 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 PTPN1P18031 435 aaKnown RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 KCNA4P22459 653 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 GNL1P36915 607 aaPredicted RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 DGKEP52429 567 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 CDH8P55286 799 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 PSMD2Q13200 908 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 CUL4BQ13620 913 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 DHCR24Q15392 516 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 SURF1Q15526 300 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 C2orf27AQ580R0 203 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 EMC10Q5UCC4 262 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 FOXD4L5Q5VV16 416 aaPredicted RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 PMS2CLQ68D20 193 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 RHBDF2Q6PJF5 856 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 UNC13DQ70J99 1090 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 ADGRG2Q8IZP9 1017 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 CCDC33Q8N5R6 958 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 FSIP1Q8NA03 581 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 ZMIZ2Q8NF64 920 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 OR6B3Q8NGW1 331 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 FOXD4L4Q8WXT5 416 aaPredicted RBP11.36□□□□□ -0.59
USE1-203ENST00000593597 ACDQ96AP0 544 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 CEP295NLQ96MC4 621 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 KCNK16Q96T55 309 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 VPS45Q9NRW7 570 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 TRPM5Q9NZQ8 1165 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 HMGXB4Q9UGU5 601 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 MMP17Q9ULZ9 603 aa11.36□□□□□ -0.59
USE1-203ENST00000593597 UBE4BO95155 1302 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 LNP1A1A4G5 178 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 LRRIQ3A6PVS8 624 aaPredicted RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 PATE3B3GLJ2 98 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 SGK1O00141 431 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 GIPC1O14908 333 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 COCHO43405 550 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CUTAO60888 179 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 ADAM23O75077 832 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 YEATS4O95619 227 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CENPBP07199 599 aaPredicted RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 PFKLP17858 780 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 TNNI1P19237 187 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 KIR2DL1P43626 348 aaPredicted RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 AMPD2Q01433 879 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CREB5Q02930 508 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 PKP1Q13835 747 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 WDR72Q3MJ13 1102 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 ANO7Q6IWH7 933 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 FAM35AQ86V20 835 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 C12orf50Q8NA57 414 aaPredicted RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 IL17RCQ8NAC3 791 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 B3GALNT2Q8NCR0 500 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 SCAMP5Q8TAC9 235 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 OLIG1Q8TAK6 271 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 P2RY11Q96G91 374 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CNOT6LQ96LI5 555 aaKnown RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 LSM14BQ9BX40 385 aaKnown RBP11.35□□□□□ -0.59
USE1-203ENST00000593597 BACH2Q9BYV9 841 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 SNX25Q9H3E2 840 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CUEDC2Q9H467 287 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CCSER2Q9H7U1 834 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 SLC39A2Q9NP94 309 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
USE1-203ENST00000593597 CACNA1EQ15878 2313 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms