RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 KLHL30Q0D2K2 578 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 IFRD2Q12894 506 aaPredicted RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PABPC1LQ4VXU2 614 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PKDCCQ504Y2 493 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 NAA35Q5VZE5 725 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 ARHGAP17Q68EM7 881 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 RAD9BQ6WBX8 426 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 CLEC20AQ6ZU45 233 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 SPATA2LQ8IUW3 424 aaPredicted RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 SCN4BQ8IWT1 228 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 TCEAL8Q8IYN2 117 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PLCD3Q8N3E9 789 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 SPATA18Q8TC71 538 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 GIPC2Q8TF65 315 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 ING5Q8WYH8 240 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 FAXDC2Q96IV6 333 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PIWIL1Q96J94 861 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 HNRNPABQ99729 332 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 AGPAT1Q99943 283 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 EDEM3Q9BZQ6 932 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 AIPL1Q9NZN9 384 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 DNMT3BQ9UBC3 853 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 AFF4Q9UHB7 1163 aaKnown RBP10.2□□□□□ -0.78
DDX39A-220ENST00000593008 INSL5Q9Y5Q6 135 aa10.2□□□□□ -0.78
DDX39A-220ENST00000593008 PATJQ8NI35 1801 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 TMEM221A6NGB7 291 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 HHLA1C9JL84 531 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 M0R296 226 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 ZNF263O14978 683 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 ATMINO43313 823 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-220ENST00000593008 PAPLNO95428 1278 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 HAPLN1P10915 354 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-220ENST00000593008 COL9A1P20849 921 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 HNRNPH3P31942 346 aaKnown RBP10.19□□□□□ -0.78
DDX39A-220ENST00000593008 PRKCIP41743 596 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 CDR2Q01850 454 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 GFPT1Q06210 699 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-220ENST00000593008 TWF1Q12792 350 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 MEA1Q16626 185 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 SLC5A9Q2M3M2 681 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 MGAT5BQ3V5L5 792 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 PTPN20Q4JDL3 420 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 TPGS2Q68CL5 300 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 LCLAT1Q6UWP7 414 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 TRIM67Q6ZTA4 783 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 HFE2Q6ZVN8 426 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 CNGA4Q8IV77 575 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 DCP1BQ8IZD4 617 aaKnown RBP10.19□□□□□ -0.78
DDX39A-220ENST00000593008 OR8K1Q8NGG5 319 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 SLC30A5Q8TAD4 765 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 CLEC4CQ8WTT0 213 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 CPA5Q8WXQ8 436 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 TNIP3Q96KP6 325 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 FAM81BQ96LP2 452 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 CORO1BQ9BR76 489 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 DESI2Q9BSY9 194 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 PACSIN1Q9BY11 444 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 KCNK12Q9HB15 430 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■□ 20.4
DDX39A-220ENST00000593008 MYO6Q9UM54 1294 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 NENFQ9UMX5 172 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 SORCS3Q9UPU3 1222 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 PCDHB5Q9Y5E4 795 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 C2orf16Q68DN1 1984 aa10.19□□□□□ -0.78
DDX39A-220ENST00000593008 A0A087X0T9 212 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 PRR33A8MZF0 331 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 ERBB2P04626 1255 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 SERPING1P05155 500 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 RHOP08100 348 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 FAM163BP0C2L3 166 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 FAM228BP0C875 321 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 FAM200BP0CF97 657 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 LAMP2P13473 410 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 NPR3P17342 541 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 FECHP22830 423 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 GPD2P43304 727 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 NOMO3P69849 1222 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 CCZ1BP86790 482 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 CCZ1P86791 482 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 PDCLQ13371 301 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 CNGA2Q16280 664 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 ASTE1Q2TB18 679 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 CYP4A22Q5TCH4 519 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 PMF1Q6P1K2 205 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 MMS22LQ6ZRQ5 1243 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 TOGARAM2Q6ZUX3 1019 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 PIGZQ86VD9 579 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 TTC39CQ8N584 583 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 ACRBPQ8NEB7 543 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 ZNF397Q8NF99 534 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-220ENST00000593008 SCAMP5Q8TAC9 235 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 FGF13Q92913 245 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 TCEAL4Q96EI5 215 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 SMARCD1Q96GM5 515 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 CPXM1Q96SM3 734 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 C11orf70Q9BRQ4 267 aa10.18□□□□□ -0.78
DDX39A-220ENST00000593008 DUSP16Q9BY84 665 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms