RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ARHGAP23Q9P227 1491 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 A0A0U1RQJ8 604 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 CYTH3O43739 400 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 INPP1P49441 399 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 NDUFV1P49821 464 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 INPP5AQ14642 412 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 LRRC6Q86X45 466 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 TSPAN17Q96FV3 270 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 HEY2Q9UBP5 337 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 HAO1Q9UJM8 370 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 RIC1Q4ADV7 1423 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 GRAP2O75791 330 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ANP32DO95626 131 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 LSM8O95777 96 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 NAMPTP43490 491 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ARMC6Q6NXE6 501 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 C16orf87Q6PH81 154 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 SPOCD1Q6ZMY3 1216 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 DDIASQ8IXT1 998 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 SPATA20Q8TB22 786 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 PPP1R2P1Q96PQ5 205 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 VWA5AO00534 786 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 TLL1O43897 1013 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 THP07101 528 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ACADMP11310 421 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 PCNX4Q63HM2 1172 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ARID3BQ8IVW6 561 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 TASP1Q9H6P5 420 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 UBOX5O94941 541 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ATP6V1G2O95670 118 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PDGFRBP09619 1106 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 MYL4P12829 197 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 FDFT1P37268 417 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ARHGEF7Q14155 803 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 GOLGA7BQ2TAP0 167 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 C10orf120Q5SQS8 335 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 UBA3Q8TBC4 463 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ACSF2Q96CM8 615 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 DSEQ9UL01 958 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 SHMT1P34896 483 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PRKCIP41743 596 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 CLCN3P51790 818 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 SLC12A3P55017 1021 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 FOXR1Q6PIV2 292 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 C7orf61Q8IZ16 206 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 SNX19Q92543 992 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PCDHA3Q9Y5H8 950 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 BTNL10A8MVZ5 291 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 OGTO15294 1046 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 TM9SF1O15321 606 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ERFP50548 548 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 OVGP1Q12889 678 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 TRIP10Q15642 601 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 TMEM259Q4ZIN3 620 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 TTMPQ5BVD1 217 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 EFHC1Q5JVL4 640 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 MREGQ8N565 214 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 E5RI56 91 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PIK3CDO00329 1044 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ANGPT2O15123 496 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 MTSS1O43312 755 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 ATICP31939 592 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 CCL23P55773 120 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 LRRC36Q1X8D7 754 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 MOB2Q70IA6 237 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PRUNE1Q86TP1 453 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 RMDN1Q96DB5 314 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 HPDLQ96IR7 371 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 EIF2AQ9BY44 585 aaKnown RBP13.19□□□□□ -0.3
DNMT1-228ENST00000592705 CCDC134Q9H6E4 229 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
DNMT1-228ENST00000592705 FSBPO95073 299 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 ENO3P13929 434 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-228ENST00000592705 PBX1P40424 430 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 COPAP53621 1224 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 FSTL1Q12841 308 aa13.18□□□□□ -0.3
DNMT1-228ENST00000592705 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■■□□□ 13.7
DNMT1-228ENST00000592705 PDK2Q15119 407 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms