RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MAMDC4Q6UXC1 1216 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 TMEM108Q6UXF1 575 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 Q6ZSN1 163 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CLNKQ7Z7G1 428 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CLASRPQ8N2M8 674 aaKnown RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 ZDHHC12Q96GR4 267 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 DDX23Q9BUQ8 820 aaKnown RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 GPR87Q9BY21 358 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 TP63Q9H3D4 680 aaPredicted RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 SAYSD1Q9NPB0 183 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 SRP68Q9UHB9 627 aaKnown RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 CHST2Q9Y4C5 530 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 HS3ST4Q9Y661 456 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CLIP1P30622 1438 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 PRAMEF33A0A0G2JMD5 474 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 PATE3B3GLJ2 98 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 PRRT4C9JH25 899 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 EIF3FO00303 357 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 ZNF185O15231 689 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 PRAMEF10O60809 474 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 RASAL1O95294 804 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 COMTP21964 271 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 CFPP27918 469 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 DDIT3P35638 169 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 MAN2A2P49641 1150 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 HSD11B2P80365 405 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 OCA2Q04671 838 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 DYRK1AQ13627 763 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 ATP1A4Q13733 1029 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 EFR3AQ14156 821 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 HLXQ14774 488 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 MAPRE1Q15691 268 aaKnown RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 KLHL17Q6TDP4 642 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 MOGAT3Q86VF5 341 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 C1QL4Q86Z23 238 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 FAM89AQ96GI7 184 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 SSBP3Q9BWW4 388 aaPredicted RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 SLC25A32Q9H2D1 315 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 CXorf36Q9H7Y0 433 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 KIF17Q9P2E2 1029 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 KCNE5Q9UJ90 142 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 NDRG4Q9ULP0 352 aaKnown RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 AATKQ6ZMQ8 1374 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 NUP153P49790 1475 aaKnown RBP7.29□□□□□ -1.24
VMP1-215ENST00000592619 ABCC10Q5T3U5 1492 aa7.29□□□□□ -1.24
VMP1-215ENST00000592619 XDHP47989 1333 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 CEP162Q5TB80 1403 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 hCG_1984214I3L0E3 225 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 TRIM24O15164 1050 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 CD3EAPO15446 510 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 AGR2O95994 175 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 PNLIPRP1P54315 467 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 RNASE9P60153 205 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 TBX2Q13207 712 aaPredicted RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 E2F2Q14209 437 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 TIGD6Q17RP2 521 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 PDCD4Q53EL6 469 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 MAPKAPK5Q8IW41 473 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 FTSJ3Q8IY81 847 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 SPARTQ8N0X7 666 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 OR1N1Q8NGS0 311 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 KCNC2Q96PR1 638 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 OSBPL9Q96SU4 736 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 ZCWPW1Q9H0M4 648 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 PABPC3Q9H361 631 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 PRDM8Q9NQV8 689 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 SWAP70Q9UH65 585 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 MRPS17Q9Y2R5 130 aaKnown RBP7.28□□□□□ -1.24
VMP1-215ENST00000592619 GLI2P10070 1586 aa7.28□□□□□ -1.24
VMP1-215ENST00000592619 A0A0B4J269 797 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 GRXCR1A8MXD5 290 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 FCHO1O14526 889 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 TOR1BO14657 336 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 PCDH17O14917 1159 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 RGS10O43665 173 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 CCNT2O60583 730 aaKnown RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 SRGAP2O75044 1071 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 ACTL6BO94805 426 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 VIPP01282 170 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 PYGLP06737 847 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 ELANEP08246 267 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 ARP10275 920 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 BDNFP23560 247 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 NDUFV1P49821 464 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 SCNN1GP51170 649 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 PRKAG1P54619 331 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 RPS7P62081 194 aaKnown RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 MC2RQ01718 297 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 TAF12Q16514 161 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 INTS11Q5TA45 600 aaKnown RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 Q6ZRM9 215 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 LRRC55Q6ZSA7 311 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 MICALCLQ6ZW33 695 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms