RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 TMPRSS15P98073 1019 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 TMCO4Q5TGY1 634 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 TTC39BQ5VTQ0 682 aaPredicted RBP18.75■□□□□ 0.59
SPC24-206ENST00000592540 SCARA3Q6AZY7 606 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 TRIM42Q8IWZ5 723 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 DRAXINQ8NBI3 349 aaPredicted RBP18.75■□□□□ 0.59
SPC24-206ENST00000592540 TMEM35BQ8NCS4 154 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 MCPH1Q8NEM0 835 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 ACAP3Q96P50 834 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 CCDC106Q9BWC9 280 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 HOMER2Q9NSB8 354 aa18.75■□□□□ 0.59
SPC24-206ENST00000592540 FAM155BO75949 473 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 KDELR1P24390 212 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 IL1R2P27930 398 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 TAZQ16635 292 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 LIN52Q52LA3 116 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 CES4AQ5XG92 561 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 ATG16L1Q676U5 607 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 ARHGAP22Q7Z5H3 698 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 CPXCR1Q8N123 301 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 UBR7Q8N806 425 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 OR5B17Q8NGF7 314 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 E2F7Q96AV8 911 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 MTBPQ96DY7 904 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 ZNF395Q9H8N7 513 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 PLLPQ9Y342 182 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 STYXL1Q9Y6J8 313 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 TESPA1A2RU30 521 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 BUD23O43709 281 aaKnown RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 RNASEH1O60930 286 aaKnown RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 DGAT1O75907 488 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 WEE2P0C1S8 567 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 PSMA2P25787 234 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 NCOA4Q13772 614 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 ZBTB41Q5SVQ8 909 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 SLC26A11Q86WA9 606 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 WDTC1Q8N5D0 677 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 ARFGAP1Q8N6T3 406 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 EZH1Q92800 747 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 ZBTB45Q96K62 511 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 CGRRF1Q99675 332 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 CENPKQ9BS16 269 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 POLR3FQ9H1D9 316 aaPredicted RBP18.74■□□□□ 0.59
SPC24-206ENST00000592540 IL1RAPL1Q9NZN1 696 aa18.74■□□□□ 0.59
SPC24-206ENST00000592540 KIAA1217Q5T5P2 1943 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 H0YCG3 227 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 LRCH4O75427 683 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 SPAG6O75602 509 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 KRT7P08729 469 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 CD48P09326 243 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 STIP1P31948 543 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 RFC1P35251 1148 aaPredicted RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 NRLP54845 237 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 AQP5P55064 265 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 GPAT2Q6NUI2 795 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 KYAT3Q6YP21 454 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 THNSL1Q8IYQ7 743 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 SLC25A41Q8N5S1 370 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 RDM1Q8NG50 284 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 STK32BQ9NY57 414 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 SLC9A2Q9UBY0 812 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 SLC4A7Q9Y6M7 1214 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 DOCK5Q9H7D0 1870 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 FKBP6O75344 327 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 KITP10721 976 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 ALDH18A1P54886 795 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 RPS6P62753 249 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 HNRNPDQ14103 355 aaKnown RBP18.73■□□□□ 0.59
SPC24-206ENST00000592540 CHI3L2Q15782 390 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 TBCCQ15814 346 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 TEX44Q53QW1 395 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 RAPH1Q70E73 1250 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 B4GALNT2Q8NHY0 566 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 C1orf21Q9H246 121 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 VCX3BQ9H321 246 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 EBF3Q9H4W6 596 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 VCX3AQ9NNX9 186 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 SIRPGQ9P1W8 387 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 TBC1D30Q9Y2I9 924 aa18.73■□□□□ 0.59
SPC24-206ENST00000592540 CCDC195A0A1B0GUA6 201 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 PRR5-ARHGAP8B1AHC4 643 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 STAM2O75886 525 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 C1QAP02745 245 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 MRPS5P82675 430 aaKnown RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 ARHGAP8P85298 464 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 CDK18Q07002 472 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 SYCP2LQ5T4T6 812 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 PPM1NQ8N819 430 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 ZNF518BQ9C0D4 1074 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 PNPLA8Q9NP80 782 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 MARCOQ9UEW3 520 aaPredicted RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 SNRPAP09012 282 aaKnown RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 RBP3P10745 1247 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 HADHQ16836 314 aaKnown RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 ZNF394Q53GI3 561 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 ANGEL2Q5VTE6 544 aaKnown RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 ACAD11Q709F0 780 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms