RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 LMAN1LQ9HAT1 526 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 CYP3A43Q9HB55 503 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 RBM12Q9NTZ6 932 aaKnown RBP16.12■□□□□ 0.17
ERCC1-213ENST00000592023 CTNND2Q9UQB3 1225 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 WNT6Q9Y6F9 365 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 R4GN57 208 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 CACNA1HO95180 2353 aa16.12■□□□□ 0.17
ERCC1-213ENST00000592023 PROB1E7EW31 1015 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 CILPO75339 1184 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 RTN3O95197 1032 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-213ENST00000592023 BMP6P22004 513 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 YWHAQP27348 245 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 PPP1R2P41236 205 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 IFNAR2P48551 515 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 PDE6CP51160 858 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 MLLT6P55198 1093 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-213ENST00000592023 MAP3K7CLP57077 242 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 MTAPQ13126 283 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 RUNX3Q13761 415 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 PON2Q15165 354 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 ZMIZ2Q8NF64 920 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 SCAMP5Q8TAC9 235 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 NELFBQ8WX92 580 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 JAKMIP2Q96AA8 810 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 DHTKD1Q96HY7 919 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-213ENST00000592023 SMOQ99835 787 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 ARID3AQ99856 593 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 ARMCX3Q9UH62 379 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-213ENST00000592023 ARHGAP26Q9UNA1 814 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 MYH10P35580 1976 aa16.11■□□□□ 0.17
ERCC1-213ENST00000592023 PRR23AA6NEV1 266 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 OTOL1A6NHN0 477 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 BEST1O76090 585 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 OAS1P00973 400 aaKnown RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 FAM200BP0CF97 657 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 CHRNB1P11230 501 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 PPP3CCP48454 512 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 MCCD1P59942 119 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 UBE2HP62256 183 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 CSTF1Q05048 431 aaKnown RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 MORC3Q14149 939 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 LRRC32Q14392 662 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 PDGFRLQ15198 375 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 ZNF394Q53GI3 561 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 PDZD8Q8NEN9 1154 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 SLC35C1Q96A29 364 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 DUS2Q9NX74 493 aaKnown RBP16.1■□□□□ 0.17
ERCC1-213ENST00000592023 SMPD4Q9NXE4 827 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 GMIPQ9P107 970 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 FBXO4Q9UKT5 387 aa16.1■□□□□ 0.17
ERCC1-213ENST00000592023 PPP1R3GB7ZBB8 358 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 TNFRSF10BO14763 440 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 OLFM2O95897 454 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 PFKLP17858 780 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 STX17P56962 302 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 TTI2Q6NXR4 508 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 ZC3H14Q6PJT7 736 aaKnown RBP16.09■□□□□ 0.17
ERCC1-213ENST00000592023 Q6ZS52 159 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 CPA6Q8N4T0 437 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 OSCP1Q8WVF1 389 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 CYFIP2Q96F07 1278 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 CEP63Q96MT8 703 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 DUSP9Q99956 384 aaKnown RBP16.09■□□□□ 0.17
ERCC1-213ENST00000592023 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
ERCC1-213ENST00000592023 CPQQ9Y646 472 aa16.09■□□□□ 0.17
ERCC1-213ENST00000592023 BICDL2A1A5D9 508 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 LEFTY2O00292 366 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 SCAMP3O14828 347 aaKnown RBP16.08■□□□□ 0.16
ERCC1-213ENST00000592023 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
ERCC1-213ENST00000592023 TCF3P15923 654 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 SLC7A9P82251 487 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 ZXDBP98169 803 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 PAK1Q13153 545 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 CAMK4Q16566 473 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 GPRIN1Q7Z2K8 1008 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 TATDN2Q93075 761 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 ATP2A3Q93084 1043 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 HNRNPABQ99729 332 aaKnown RBP16.08■□□□□ 0.16
ERCC1-213ENST00000592023 IER2Q9BTL4 223 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 METTL14Q9HCE5 456 aaKnown RBP16.08■□□□□ 0.16
ERCC1-213ENST00000592023 CSNK1G1Q9HCP0 422 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 CISHQ9NSE2 258 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 F5P12259 2224 aa16.08■□□□□ 0.16
ERCC1-213ENST00000592023 FANCMQ8IYD8 2048 aa16.07■□□□□ 0.16
ERCC1-213ENST00000592023 COCHO43405 550 aa16.07■□□□□ 0.16
ERCC1-213ENST00000592023 LRMPQ12912 555 aa16.07■□□□□ 0.16
ERCC1-213ENST00000592023 GAS6Q14393 721 aa16.07■□□□□ 0.16
ERCC1-213ENST00000592023 EML3Q32P44 896 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms