RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 PPP1R9BQ96SB3 815 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 C17orf80Q9BSJ5 609 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 FAM204AQ9H8W3 233 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 TRIM36Q9NQ86 728 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 CDY1Q9Y6F8 540 aa4.4□□□□□ -1.71
TPM4-214ENST00000591645 TMEM233B4DJY2 109 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 UBE2Q2LH0YL09 131 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 CYP2D6P10635 497 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 E2F1Q01094 437 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 PPP2R5AQ15172 486 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 CNN3Q15417 329 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 LY6KQ17RY6 165 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 INSCQ1MX18 579 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 CERKLQ49MI3 558 aaPredicted RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 CEP78Q5JTW2 689 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 L1TD1Q5T7N2 865 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 APOA5Q6Q788 366 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 RAB11FIP4Q86YS3 637 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 RAVER1Q8IY67 606 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 CHPFQ8IZ52 775 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 SPARTQ8N0X7 666 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 MPP5Q8N3R9 675 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 SIRT6Q8N6T7 355 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 MAGEB6Q8N7X4 407 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 Q8N9P0 234 aaPredicted RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 RAPGEF4Q8WZA2 1011 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 RPL36ALQ969Q0 106 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 PPP2R3CQ969Q6 453 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 SPSB4Q96A44 273 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 PRR25Q96S07 402 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 PRSS22Q9GZN4 317 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 DHX36Q9H2U1 1008 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 STK32BQ9NY57 414 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 DNMT3BQ9UBC3 853 aaKnown RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 CCNL1Q9UK58 526 aaPredicted RBP4.39□□□□□ -1.71
TPM4-214ENST00000591645 AMFRQ9UKV5 643 aa4.39□□□□□ -1.71
TPM4-214ENST00000591645 CYP2D7A0A087X1C5 515 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 LOC102723971A0A1B0GUV8 181 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 PRPF3O43395 683 aaKnown RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 HRGP04196 525 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 S100BP04271 92 aaPredicted RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 EPHA3P29320 983 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 MPGP29372 298 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 GKP32189 559 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 PTGER1P34995 402 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 RENBPP51606 427 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 CACNB3P54284 484 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 TIAL1Q01085 375 aaKnown RBP eCLIP4.38□□□□□ -1.713e-7■■□□□ 12.8
TPM4-214ENST00000591645 KLF9Q13886 244 aaPredicted RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 MLC1Q15049 377 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 SUPT20HL1Q3ZLR7 823 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 RNASE12Q5GAN4 147 aaKnown RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 TMEM63BQ5T3F8 832 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 TMEM171Q8WVE6 324 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 CIPCQ9C0C6 399 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 BHMT2Q9H2M3 363 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 GBA2Q9HCG7 927 aaPredicted RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 AFF4Q9UHB7 1163 aaKnown RBP4.38□□□□□ -1.71
TPM4-214ENST00000591645 USP19O94966 1318 aa4.38□□□□□ -1.71
TPM4-214ENST00000591645 SMIM35A0A1B0GVV1 85 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 TCRBV5S1A1TA0A578 114 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 CFAP69A5D8W1 941 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 BTBD19C9JJ37 291 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 PYCARD-AS1I3L0S3 204 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 PSMD9O00233 223 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 TP73O15350 636 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 CD3EAPO15446 510 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 MOSPD3O75425 235 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 PMPCBO75439 489 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 BCAR3O75815 825 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 PDE8BO95263 885 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 VNN1O95497 513 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 FGAP02671 866 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 MYBP10242 640 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 CYP2A6P11509 494 aaPredicted RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 PHKG2P15735 406 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 SFPQP23246 707 aaKnown RBP eCLIP4.37□□□□□ -1.71
TPM4-214ENST00000591645 FPR3P25089 353 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 PRKAR1BP31321 381 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 SUMO3P55854 103 aaPredicted RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 PTCHD3Q3KNS1 767 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 C4orf46Q504U0 113 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 ZDHHC24Q6UX98 284 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 DPY19L3Q6ZPD9 716 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 BCDIN3DQ7Z5W3 292 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 SRGAP1Q7Z6B7 1085 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 LINC01465Q8N7H1 131 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 DNAJB14Q8TBM8 379 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 C5orf34Q96MH7 638 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 FYTTD1Q96QD9 318 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 VN1R3Q9BXE9 311 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 QTRT1Q9BXR0 403 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
TPM4-214ENST00000591645 ASIC5Q9NY37 505 aa4.37□□□□□ -1.71
TPM4-214ENST00000591645 TFCP2L1Q9NZI6 479 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms