RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 HAT1O14929 419 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 ZWINTO95229 277 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 MAPK7Q13164 816 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 SPCS2Q15005 226 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 SFT2D3Q587I9 215 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 MFSD5Q6N075 450 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 ISLR2Q6UXK2 745 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 PAIP1Q9H074 479 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 SEPT10Q9P0V9 454 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 RSL24D1Q9UHA3 163 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 DSEQ9UL01 958 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 GPSM3Q9Y4H4 160 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
SMARCA4-217ENST00000591595 DDX39AO00148 427 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 DDX3YO15523 660 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 GAS7O60861 476 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 SREBF1P36956 1147 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 MOGSQ13724 837 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 ALLCQ8N6M5 410 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 SLC20A1Q8WUM9 679 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 LENG9Q96B70 501 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 SEMA4AQ9H3S1 761 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 C12orf4Q9NQ89 552 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 OLFML3Q9NRN5 406 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 PPEF1O14829 653 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CLK3P49761 638 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 KRT76Q01546 638 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 KRT35Q92764 455 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 SHCBP1LQ9BZQ2 653 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 MARCH7Q9H992 704 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 IFT122Q9HBG6 1241 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 FAM187AA6NFU0 413 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 F8W8V4 182 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 AQP4P55087 323 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 NUP107P57740 925 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 STRN3Q13033 797 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 DHX34Q14147 1143 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 MPP2Q14168 576 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 OGFOD2Q6N063 350 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CCDC137Q6PK04 289 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 CPSF7Q8N684 471 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 RSPH9Q9H1X1 276 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 NCKIPSDQ9NZQ3 722 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 RABGEF1Q9UJ41 708 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 POU2F3Q9UKI9 436 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 SYNGAP1Q96PV0 1343 aa12.73□□□□□ -0.37
SMARCA4-217ENST00000591595 ATMINO43313 823 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SEC24DO94855 1032 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 NDUFB10O96000 172 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 KCNJ1P48048 391 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SLC5A3P53794 718 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CALCOCO2Q13137 446 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DCLRE1AQ6PJP8 1040 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CLNKQ7Z7G1 428 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PCYOX1LQ8NBM8 494 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PEX13Q92968 403 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 MBOAT7Q96N66 472 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 AGPAT1Q99943 283 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PHTF1Q9UMS5 762 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 COG5Q9UP83 839 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 ARHGEF35A5YM69 484 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 BRAFP15056 766 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 FOXN2P32314 431 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 GCLMP48507 274 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 STAT2P52630 851 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 IST1P53990 364 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 C21orf59P57076 290 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 POU5F1Q01860 360 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 KCNC4Q03721 635 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 PPATQ06203 517 aa12.72□□□□□ -0.37
SMARCA4-217ENST00000591595 SLC45A4Q5BKX6 768 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms