RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 DEPDC1BQ8WUY9 529 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 RNF14Q9UBS8 474 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 ZFP37Q9Y6Q3 630 aaPredicted RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 ASLP04424 464 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 HSPA9P38646 679 aaKnown RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 NCAPHQ15003 741 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TMC5Q6UXY8 1006 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TOP6BLQ8N6T0 577 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 BSNDQ8WZ55 320 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3DA0A087WVF3 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3IA0A087WXS9 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3EA0A087X179 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3KA0A087X1G2 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3FA6NER0 549 aaPredicted RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3LB9A6J9 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 GRM6O15303 877 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3HP0C7X1 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 VPS41P49754 854 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 FASTKD1Q53R41 847 aaKnown RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3GQ6DHY5 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3CQ6IPX1 549 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 ESRP1Q6NXG1 681 aaKnown RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TBC1D3Q8IZP1 549 aaPredicted RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 CXorf40BQ96DE9 158 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TMEM176AQ96HP8 235 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 HBS1LQ9Y450 684 aaKnown RBP11.89□□□□□ -0.51
SEH1L-208ENST00000590843 CDY1Q9Y6F8 540 aa11.89□□□□□ -0.51
SEH1L-208ENST00000590843 TIMM44O43615 452 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 WEE2P0C1S8 567 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 NOS2P35228 1153 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 RARRES1P49788 294 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 AMHR2Q16671 573 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 NAPEPLDQ6IQ20 393 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 SZRD1Q7Z422 152 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 CYP3A5P20815 502 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 GDI1P31150 447 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 CENPUQ71F23 418 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 CELF5Q8N6W0 485 aaKnown RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 LRRC52Q8N7C0 313 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 EXD1Q8NHP7 514 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 POF1BQ8WVV4 589 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 OTUB1Q96FW1 271 aaPredicted RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 GTPBP2Q9BX10 602 aaKnown RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TRIM9Q9C026 710 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 DNAJC17Q9NVM6 304 aaKnown RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 INTS13Q9NVM9 706 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 SOHLH2Q9NX45 425 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 NDOR1Q9UHB4 597 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TIMM13Q9Y5L4 95 aaPredicted RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 GCATO75600 419 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 CRTAMO95727 393 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 MLYCDO95822 493 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TYMPP19971 482 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 GJA8P48165 433 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 FMO5P49326 533 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 SETMARQ53H47 684 aaPredicted RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 QSOX1O00391 747 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 MSH3P20585 1137 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 HLA-DQA1Q5Y7H0 255 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF852Q6ZMS4 543 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 LGI2Q8N0V4 545 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 RTP3Q9BQQ7 232 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 COG4Q9H9E3 785 aa11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TPX2Q9ULW0 747 aaKnown RBP11.88□□□□□ -0.51
SEH1L-208ENST00000590843 TCRBV5S4A2TA0A5A2 114 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 INPPL1O15357 1258 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 TRIM67Q6ZTA4 783 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF564Q8TBZ8 553 aaPredicted RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 EXO5Q9H790 373 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 UVRAGQ9P2Y5 699 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 IL1BP01584 269 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 CXCR2P25025 360 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ELP6Q0PNE2 266 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 BEND7Q8N7W2 519 aaPredicted RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 FEM1CQ96JP0 617 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 PHF24Q9UPV7 400 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 SMIM24O75264 130 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 PRNPP04156 253 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ANXA6P08133 673 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ARL4CP56559 192 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 XRCC4Q13426 336 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 CCDC6Q16204 474 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 NXNQ6DKJ4 435 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ADGRA1Q86SQ6 560 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 SKAP1Q86WV1 359 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms