RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	INO80B	Q9C086	356 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	BRD8	Q9H0E9	1235 aa		5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	ELAC1	Q9H777	363 aa	Known RBP	5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	PLA2G3	Q9NZ20	509 aa		5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	USP15	Q9Y4E8	981 aa	Predicted RBP	5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608	LAS1L	Q9Y4W2	734 aa	Known RBP	5.64	□□□□□ -1.51
ATP9B-223	ENST00000590608		B8ZZF3	427 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	PRRG2	O14669	202 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	ZNF185	O15231	689 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	ZSCAN9	O15535	394 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	CCNT2	O60583	730 aa	Known RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	ZFPL1	O95159	310 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	NTSR2	O95665	410 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	VIP	P01282	170 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FGFR4	P22455	802 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	MGAT1	P26572	445 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	APOBEC3A	P31941	199 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	ELF1	P32519	619 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	KRT9	P35527	623 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	BUD31	P41223	144 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FOXL1	Q12952	345 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	TRPC3	Q13507	836 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FHL3	Q13643	280 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	TRIM71	Q2Q1W2	868 aa	Known RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	C1QL3	Q5VWW1	255 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	SYT13	Q7L8C5	426 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	COLGALT2	Q8IYK4	626 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	SPART	Q8N0X7	666 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	PCYOX1L	Q8NBM8	494 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	OR56A1	Q8NGH5	318 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	POC1B	Q8TC44	478 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	MCRS1	Q96EZ8	462 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM227B	Q96M60	508 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	PNKP	Q96T60	521 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	TEX101	Q9BY14	249 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	VPS16	Q9H269	839 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM83D	Q9H4H8	585 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	CHODL	Q9H9P2	273 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	BLOC1S4	Q9NUP1	217 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	TMOD4	Q9NZQ9	345 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	HECA	Q9UBI9	543 aa	Predicted RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	NRBP1	Q9UHY1	535 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	KCND3	Q9UK17	655 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	NDRG4	Q9ULP0	352 aa	Known RBP	5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	JAG2	Q9Y219	1238 aa		5.63	□□□□□ -1.51
ATP9B-223	ENST00000590608	PNMA6E	A0A0J9YXQ4	647 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A18P	A6NE21	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A16P	A6NEW6	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A9P	A6NNJ1	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A5P	A8MXJ8	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	KIF28P	B7ZC32	967 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	ADM5	C9JUS6	153 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	CD3EAP	O15446	510 aa	Known RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FOXD2	O60548	495 aa	Predicted RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	MFAP3L	O75121	409 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	TAF5L	O75529	589 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	RPP40	O75818	363 aa	Known RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	IPO13	O94829	963 aa	Known RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	PRKCB	P05771	671 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	CSF1R	P07333	972 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A15P	P0C7V4	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FAM90A14P	P0C7W9	464 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	ITGAL	P20701	1170 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	LRPAP1	P30533	357 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	SLC5A2	P31639	672 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	AARS	P49588	968 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	POLE2	P56282	527 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	RNASE9	P60153	205 aa	Known RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	ACTR2	P61160	394 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	PPP2CB	P62714	309 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	PPP2CA	P67775	309 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	SATB1	Q01826	763 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	UBE3A	Q05086	875 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	KIAA2012	Q0VF49	1180 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	PDCL	Q13371	301 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	ATP1A4	Q13733	1029 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	RPS6KA2	Q15349	733 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	CD300E	Q496F6	205 aa	Predicted RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	AGAP9	Q5VTM2	703 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	CCDC30	Q5VVM6	783 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	D2HGDH	Q8N465	521 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	OR6Y1	Q8NGX8	325 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	TWNK	Q96RR1	684 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	KRTAP9-3	Q9BYQ3	159 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	HELLS	Q9NRZ9	838 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	DNAJB11	Q9UBS4	358 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	VPS51	Q9UID3	782 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	SERTAD3	Q9UJW9	196 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	FBXO2	Q9UK22	296 aa	Predicted RBP	5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	CA14	Q9ULX7	337 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	DUSP10	Q9Y6W6	482 aa		5.62	□□□□□ -1.51
ATP9B-223	ENST00000590608	OR2W5	A6NFC9	320 aa		5.61	□□□□□ -1.51
ATP9B-223	ENST00000590608		B4E171	279 aa		5.61	□□□□□ -1.51
ATP9B-223	ENST00000590608		E7EVH7	732 aa		5.61	□□□□□ -1.51
ATP9B-223	ENST00000590608	DHH	O43323	396 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms