RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 OPHN1O60890 802 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 SERPINF2P08697 491 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 CD59P13987 128 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 PFKLP17858 780 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 PLCG1P19174 1290 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 RDXP35241 583 aaKnown RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 DDIT3P35638 169 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 EIF2DP41214 584 aaKnown RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 MAGEA11P43364 429 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 PDE6CP51160 858 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 ATXN3P54252 364 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 USP46P62068 366 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 GFPT1Q06210 699 aaPredicted RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 BYSLQ13895 437 aaKnown RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 MCM6Q14566 821 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 RHBDF2Q6PJF5 856 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 KIAA1958Q8N8K9 716 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 OR2I1PQ8NGU4 316 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 CEP76Q8TAP6 659 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 LARP4BQ92615 738 aaKnown RBP18.53■□□□□ 0.56
RETREG3-210ENST00000590541 FAM84AQ96KN4 292 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 RNF38Q9H0F5 515 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 GDAP2Q9NXN4 497 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 CLIC4Q9Y696 253 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 SCAMP3O14828 347 aaKnown RBP18.52■□□□□ 0.56
RETREG3-210ENST00000590541 ATP2C2O75185 946 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 APODP05090 189 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 KRT18P05783 430 aaKnown RBP18.52■□□□□ 0.56
RETREG3-210ENST00000590541 SLC7A9P82251 487 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 TFAMQ00059 246 aaKnown RBP18.52■□□□□ 0.56
RETREG3-210ENST00000590541 GRIN1Q05586 938 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 SCAPQ12770 1279 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 ZNF423Q2M1K9 1284 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 ADGRF2Q8IZF7 708 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 PGBD3Q8N328 593 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 MINDY1Q8N5J2 469 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 DEFB119Q8N690 84 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 ZSWIM2Q8NEG5 633 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 SPATA17Q96L03 361 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 MTMR6Q9Y217 621 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 SNX9Q9Y5X1 595 aa18.52■□□□□ 0.56
RETREG3-210ENST00000590541 GON4LQ3T8J9 2241 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 AP5Z1O43299 807 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 TBCAO75347 108 aaKnown RBP18.51■□□□□ 0.55
RETREG3-210ENST00000590541 OLFM2O95897 454 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 PCSK1P29120 753 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 GRIA2P42262 883 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 LHX1P48742 406 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 SLC39A14Q15043 492 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 SOWAHAQ2M3V2 549 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 PDZD3Q86UT5 571 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 PHTF2Q8N3S3 785 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 TOP6BLQ8N6T0 577 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 KRI1Q8N9T8 703 aaKnown RBP18.51■□□□□ 0.55
RETREG3-210ENST00000590541 CAMK1GQ96NX5 476 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 ARHGEF4Q9NR80 690 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 TRPM5Q9NZQ8 1165 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 FBXO2Q9UK22 296 aaPredicted RBP18.51■□□□□ 0.55
RETREG3-210ENST00000590541 CPQQ9Y646 472 aa18.51■□□□□ 0.55
RETREG3-210ENST00000590541 ZNF840PA6NDX5 716 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 ARHGAP33O14559 1287 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 TNFRSF4P43489 277 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 RPL6Q02878 288 aaKnown RBP18.5■□□□□ 0.55
RETREG3-210ENST00000590541 KDSRQ06136 332 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 ZNF33AQ06730 810 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 HNRNPDQ14103 355 aaKnown RBP18.5■□□□□ 0.55
RETREG3-210ENST00000590541 COL28A1Q2UY09 1125 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 C4orf50Q6ZRC1 276 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 DENND5BQ6ZUT9 1274 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 ZNF720Q7Z2F6 126 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 BRSK2Q8IWQ3 736 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 CSGALNACT2Q8N6G5 542 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 MYLPFQ96A32 169 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 EPSTI1Q96J88 318 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 FAM213AQ9BRX8 229 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 TTLL2Q9BWV7 592 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
RETREG3-210ENST00000590541 SMPD4Q9NXE4 827 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 MAGEC2Q9UBF1 373 aaPredicted RBP18.5■□□□□ 0.55
RETREG3-210ENST00000590541 SIX4Q9UIU6 781 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 LOC400499M0QZD8 3231 aa18.5■□□□□ 0.55
RETREG3-210ENST00000590541 CEP192Q8TEP8 1941 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 SMG1Q96Q15 3661 aaKnown RBP18.49■□□□□ 0.55
RETREG3-210ENST00000590541 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-210ENST00000590541 SLC9A3R1O14745 358 aaPredicted RBP18.49■□□□□ 0.55
RETREG3-210ENST00000590541 PPP1R37O75864 691 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 ADH5P11766 374 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 GABRG2P18507 467 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 BDNFP23560 247 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 LMO2P25791 158 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 GRIK1P39086 918 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 PSMC1P62191 440 aaKnown RBP18.49■□□□□ 0.55
RETREG3-210ENST00000590541 KCNA1Q09470 495 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 POSTNQ15063 836 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 RRAGBQ5VZM2 374 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 VSTM1Q6UX27 236 aa18.49■□□□□ 0.55
RETREG3-210ENST00000590541 CCDC73Q6ZRK6 1079 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms