RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OR6B3Q8NGW1 331 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 ZSCAN18Q8TBC5 510 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 TAS1R2Q8TE23 839 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 RSPRY1Q96DX4 576 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 PCED1BQ96HM7 432 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GPR88Q9GZN0 384 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 APOBEC3GQ9HC16 384 aaKnown RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 TMEM8AQ9HCN3 771 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 DNMT3LQ9UJW3 386 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 PIEZO1Q92508 2521 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 DMDP11532 3685 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 TICRRQ7Z2Z1 1910 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 PSMA7O14818 248 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 LRRN2O75325 713 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TADA3O75528 432 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 F11P03951 625 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 EPB41P11171 864 aaKnown RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 PTPN1P18031 435 aaKnown RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 WEE1P30291 646 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 CDC25CP30307 473 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 PPP1R2P41236 205 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 PIK3CAP42336 1068 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 NLRP12P59046 1061 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 RPL10AP62906 217 aaKnown RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 MDH1BQ5I0G3 518 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 VITQ6UXI7 678 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 SCARA5Q6ZMJ2 495 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 SIX5Q8N196 739 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TMEM105Q8N8V8 129 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 B3GALNT2Q8NCR0 500 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 MYRFLQ96LU7 910 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TSG101Q99816 390 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 DUSP9Q99956 384 aaKnown RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 BCO2Q9BYV7 579 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 ATXN3LQ9H3M9 355 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 ZFP14Q9HCL3 533 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 TMEM30AQ9NV96 361 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
SMAD4-211ENST00000590499 FBXL21Q9UKT6 434 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 PATJQ8NI35 1801 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 MYH10P35580 1976 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 MIA3Q5JRA6 1907 aa11.94□□□□□ -0.5
SMAD4-211ENST00000590499 SLC38A8A6NNN8 435 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 A8MXQ7 604 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CSH1P0DML2 217 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CSH2P0DML3 217 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 BDNFP23560 247 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 AVPR2P30518 371 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 VIPR2P41587 438 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 MXI1P50539 228 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CLCN5P51795 746 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CACNA2D1P54289 1103 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CYP4F8P98187 520 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CYP27A1Q02318 531 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 INCA1Q0VD86 236 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 STIM1Q13586 685 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 GPR158Q5T848 1215 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 KRT39Q6A163 491 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 LINC00528Q8N1L1 170 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 ADAM32Q8TC27 787 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 SEMA4DQ92854 862 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 SPATA17Q96L03 361 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CEP295NLQ96MC4 621 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 KCTD15Q96SI1 283 aaPredicted RBP11.93□□□□□ -0.5
SMAD4-211ENST00000590499 B3GNT5Q9BYG0 378 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 KCNH6Q9H252 994 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 SLITRK6Q9H5Y7 841 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 TASP1Q9H6P5 420 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 HMGXB4Q9UGU5 601 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CDV3Q9UKY7 258 aaKnown RBP11.93□□□□□ -0.5
SMAD4-211ENST00000590499 CA14Q9ULX7 337 aa11.93□□□□□ -0.5
SMAD4-211ENST00000590499 HELZP42694 1942 aaKnown RBP11.93□□□□□ -0.5
SMAD4-211ENST00000590499 HEPACAM2A8MVW5 462 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 ARNTLO00327 626 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 BIN1O00499 593 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 PRAMEF12O95522 483 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 P4HA1P13674 534 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 AOC1P19801 751 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 STARD6P59095 220 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 PFKPQ01813 784 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 GRM2Q14416 872 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 TAF12Q16514 161 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 CBWD6Q4V339 395 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 ARHGAP15Q53QZ3 475 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 CBWD3Q5JTY5 395 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 CBWD5Q5RIA9 395 aa11.92□□□□□ -0.5
SMAD4-211ENST00000590499 PHLDB3Q6NSJ2 640 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms