RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 PI4K2AQ9BTU6 479 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 TUBB2BQ9BVA1 445 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 UBXN6Q9BZV1 441 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 APOBEC3GQ9HC16 384 aaKnown RBP7.76□□□□□ -1.17
SMAD4-210ENST00000590061 ABCB6Q9NP58 842 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 HSFX1Q9UBD0 423 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 LZTS1Q9Y250 596 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 STXBP5LQ9Y2K9 1186 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 SCINQ9Y6U3 715 aa7.76□□□□□ -1.17
SMAD4-210ENST00000590061 A0A0A6YYK5 440 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 GABRDO14764 452 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 EPHB6O15197 1021 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 KIF5CO60282 957 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 IGHA1P01876 353 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 GALTP07902 379 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 WEE2P0C1S8 567 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 FGFR1P11362 822 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 CD19P15391 556 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ATP2A2P16615 1042 aaKnown RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 CD58P19256 250 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 MAGEA1P43355 309 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 BCAR1P56945 870 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 HTRA4P83105 476 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 PLCB3Q01970 1234 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 RAB30Q15771 203 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 CLUL1Q15846 466 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 SOWAHAQ2M3V2 549 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 TMEM240Q5SV17 173 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ARHGAP17Q68EM7 881 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF280DQ6N043 979 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 WDR59Q6PJI9 974 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 LCLAT1Q6UWP7 414 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 CHSY3Q70JA7 882 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ALDH16A1Q8IZ83 802 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 SYCE1Q8N0S2 351 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 PDCL2Q8N4E4 241 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 B3GALNT2Q8NCR0 500 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 KIAA1524Q8TCG1 905 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 IPO4Q8TEX9 1081 aaKnown RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF606Q8WXB4 792 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 LINC01599Q8WXQ3 324 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ZNF689Q96CS4 500 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 FUBP3Q96I24 572 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 TTPALQ9BTX7 342 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ELOVL4Q9GZR5 314 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 SUV39H2Q9H5I1 410 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 SYNCQ9H7C4 482 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 PRDM16Q9HAZ2 1276 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 PNPLA8Q9NP80 782 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 SEPT11Q9NVA2 429 aaKnown RBP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 UVRAGQ9P2Y5 699 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 ADAMTS1Q9UHI8 967 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 NAGPAQ9UK23 515 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 BACE2Q9Y5Z0 518 aa7.75□□□□□ -1.17
SMAD4-210ENST00000590061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
SMAD4-210ENST00000590061 CASTOR2A6NHX0 329 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 NRP1O14786 923 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 MEFVO15553 781 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 FBXO21O94952 628 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PROCP04070 461 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 TMEM253P0C7T8 217 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PTPN1P18031 435 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 IBSPP21815 317 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 IGFBP4P22692 258 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 SCNN1AP37088 669 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 VAV2P52735 878 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 NDST1P52848 882 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 BCAT1P54687 386 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 RAD23BP54727 409 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 GPC5P78333 572 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 CCZ1BP86790 482 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 CCZ1P86791 482 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 MTA1Q13330 715 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 TCEAL1Q15170 157 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 CCDC122Q5T0U0 273 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 TPGS2Q68CL5 300 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 HGSNATQ68CP4 663 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 SPOPLQ6IQ16 392 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 ACAD10Q6JQN1 1059 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 KCNT2Q6UVM3 1135 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 VSTM1Q6UX27 236 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 OTOP2Q7RTS6 562 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 DDX53Q86TM3 631 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PHF13Q86YI8 300 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 HERC6Q8IVU3 1022 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 UBR7Q8N806 425 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 ANKRD52Q8NB46 1076 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 C1orf131Q8NDD1 294 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 TRIM58Q8NG06 486 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 MYCBPAPQ8TBZ2 947 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 CLP1Q92989 425 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PPP2R3CQ969Q6 453 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 HSFY1Q96LI6 401 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 HNRNPABQ99729 332 aaKnown RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 C11orf84Q9BUA3 381 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-210ENST00000590061 GPR88Q9GZN0 384 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 NRDE2Q9H7Z3 1164 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 PARVAQ9NVD7 372 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 COMMD8Q9NX08 183 aa7.74□□□□□ -1.17
SMAD4-210ENST00000590061 DDX43Q9NXZ2 648 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms