RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RNF26Q9BY78 433 aaPredicted RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 TRPC7Q9HCX4 862 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SH3GLB2Q9NR46 395 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SSUH2Q9Y2M2 353 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 NFE2L3Q9Y4A8 694 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 OTOGQ6ZRI0 2925 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CKAP5Q14008 2032 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TRAV19A0A0A6YYK7 116 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ENO4A6NNW6 628 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 MEI4A8MW99 385 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 BCAT2O15382 392 aaPredicted RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 PCDHGA12O60330 932 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 NDUFS2O75306 463 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 APODP05090 189 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 USP17L7P0C7H9 530 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 PDIA4P13667 645 aaKnown RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 CR2P20023 1033 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 PDCP20941 246 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TNFSF9P41273 254 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 GRIA2P42262 883 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 GRK6P43250 576 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TNFRSF4P43489 277 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 RESTQ13127 1097 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 DNAJC3Q13217 504 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TRIM29Q14134 588 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 UBAP2LQ14157 1087 aaKnown RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 DHCR24Q15392 516 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 SAFBQ15424 915 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS25-204ENST00000589577 ZBTB6Q15916 424 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TAF12Q16514 161 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 KIF19Q2TAC6 998 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 KCNT1Q5JUK3 1230 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 HIST2H2BCQ6DN03 193 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 RHBDF2Q6PJF5 856 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 IL27RAQ6UWB1 636 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 FILIP1Q7Z7B0 1213 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ETFBKMTQ8IXQ9 262 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ADGRG2Q8IZP9 1017 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 EXD3Q8N9H8 876 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TRMT2BQ96GJ1 504 aaKnown RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 MRGPRX1Q96LB2 322 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 AIFM3Q96NN9 605 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ACOX2Q99424 681 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 LGMNQ99538 433 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 SLC26A6Q9BXS9 759 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 AGXT2Q9BYV1 514 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 MIR1-1HGQ9H1L0 117 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 POLD4Q9HCU8 107 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ARHGEF4Q9NR80 690 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 TMLHEQ9NVH6 421 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 ABI2Q9NYB9 513 aaPredicted RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 ARHGAP26Q9UNA1 814 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 MAGED2Q9UNF1 606 aaPredicted RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 SMC3Q9UQE7 1217 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 PCDHGA1Q9Y5H4 931 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 SNX11Q9Y5W9 270 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 COL27A1Q8IZC6 1860 aaPredicted RBP6.57□□□□□ -1.36
VPS25-204ENST00000589577 CELSR1Q9NYQ6 3014 aa6.57□□□□□ -1.36
VPS25-204ENST00000589577 NF1P21359 2839 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 SETD2Q9BYW2 2564 aaPredicted RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 MYMKA6NI61 221 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 KCNJ18B7U540 433 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 KCNK3O14649 394 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 TRIM24O15164 1050 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 PFKFB2O60825 505 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 RFPL3O75679 317 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 NOL4O94818 638 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 CYP11A1P05108 521 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 CXCL8P10145 99 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 MCF2P10911 925 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 MYF5P13349 255 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 NCAM1P13591 858 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 GCFC2P16383 781 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 IFNAR1P17181 557 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 ATP2B1P20020 1258 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 PDIA3P30101 505 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 CD6P30203 668 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 ACTN2P35609 894 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 CSNK1EP49674 416 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 ACADVLP49748 655 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 EFNA5P52803 228 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 UCNP55089 124 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 LILRA4P59901 499 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 CCT2P78371 535 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 IL9RQ01113 521 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 SSRP1Q08945 709 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 VAC14Q08AM6 782 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 TOB2Q14106 344 aaPredicted RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 SF3A1Q15459 793 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 EARS2Q5JPH6 523 aaKnown RBP6.56□□□□□ -1.36
VPS25-204ENST00000589577 C6orf132Q5T0Z8 1188 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 DCAF12L1Q5VU92 463 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 EGFLAMQ63HQ2 1017 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 ARMCX5Q6P1M9 558 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 PADI6Q6TGC4 694 aa6.56□□□□□ -1.36
VPS25-204ENST00000589577 LAYNQ6UX15 382 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms