RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ABI2Q9NYB9 513 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-209ENST00000588857 PCDHB5Q9Y5E4 795 aa23.41■■□□□ 1.34
ATG4D-209ENST00000588857 TBC1D4O60343 1298 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 TCP1P17987 556 aaKnown RBP23.4■■□□□ 1.34
ATG4D-209ENST00000588857 GLUD2P49448 558 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 CACNA2D1P54289 1103 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 KRT17Q04695 432 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 ADIGQ0VDE8 80 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 SMARCB1Q12824 385 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 PSMD5Q16401 504 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 CFAP221Q4G0U5 840 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 OLFML1Q6UWY5 402 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 ZMIZ2Q8NF64 920 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 PIK3R5Q8WYR1 880 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 HES6Q96HZ4 224 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 HERC2P3Q9BVR0 1158 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 MTMR10Q9NXD2 777 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 STK39Q9UEW8 545 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 CDC23Q9UJX2 597 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 MRFAP1Q9Y605 127 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 PATJQ8NI35 1801 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 CYP2F1P24903 491 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 GRIK1P39086 918 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 TKTL1P51854 596 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 RNASE9P60153 205 aaKnown RBP23.4■■□□□ 1.34
ATG4D-209ENST00000588857 PIGHQ14442 188 aaPredicted RBP23.4■■□□□ 1.34
ATG4D-209ENST00000588857 ZNF697Q5TEC3 545 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 JOSD2Q8TAC2 188 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 SP7Q8TDD2 431 aaPredicted RBP23.4■■□□□ 1.34
ATG4D-209ENST00000588857 CLP1Q92989 425 aaKnown RBP23.4■■□□□ 1.34
ATG4D-209ENST00000588857 OSBPL9Q96SU4 736 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 PSMB7Q99436 277 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 L2HGDHQ9H9P8 463 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 TMEM30AQ9NV96 361 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 MTRRQ9UBK8 725 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 BACE2Q9Y5Z0 518 aa23.4■■□□□ 1.34
ATG4D-209ENST00000588857 MIF4GDA9UHW6 222 aaKnown RBP23.39■■□□□ 1.33
ATG4D-209ENST00000588857 C2CD2LO14523 706 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 FBXO21O94952 628 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 DNAJB2P25686 324 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 MAN1A1P33908 653 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 SCNN1AP37088 669 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 GPR17Q13304 367 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 RSPO2Q6UXX9 243 aaPredicted RBP23.39■■□□□ 1.33
ATG4D-209ENST00000588857 UBL4BQ8N7F7 174 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 FNIP1Q8TF40 1166 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 PGLYRP2Q96PD5 576 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 PBX4Q9BYU1 374 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 PNPLA8Q9NP80 782 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 CDY1Q9Y6F8 540 aa23.39■■□□□ 1.33
ATG4D-209ENST00000588857 SRGAP2O75044 1071 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 PSMA2P25787 234 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 DSG1Q02413 1049 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 EFHC1Q5JVL4 640 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 VSTM1Q6UX27 236 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 EMC1Q8N766 993 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 FBXO22Q8NEZ5 403 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 USTQ9Y2C2 406 aa23.38■■□□□ 1.33
ATG4D-209ENST00000588857 TMEM265A0A087WTH1 108 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 F8VP50 259 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 GRAP2O75791 330 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 FGF18O76093 207 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 URODP06132 367 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 CXCR5P32302 372 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 PBX2P40425 430 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 MAGEA11P43364 429 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 RABGGTBP53611 331 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 RAB41Q5JT25 222 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 SLC8B1Q6J4K2 584 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 SLC26A9Q7LBE3 791 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 SCN4BQ8IWT1 228 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 VPS52Q8N1B4 723 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 CLEC4CQ8WTT0 213 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 C2orf15Q8WU43 125 aaKnown RBP23.37■■□□□ 1.33
ATG4D-209ENST00000588857 PIWIL1Q96J94 861 aaKnown RBP23.37■■□□□ 1.33
ATG4D-209ENST00000588857 TMEM59LQ9UK28 342 aa23.37■■□□□ 1.33
ATG4D-209ENST00000588857 HHLA1C9JL84 531 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 KCNK3O14649 394 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 TRIM66O15016 1216 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 GPD1P21695 349 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 SSR1P43307 286 aaKnown RBP23.36■■□□□ 1.33
ATG4D-209ENST00000588857 MRPS5P82675 430 aaKnown RBP23.36■■□□□ 1.33
ATG4D-209ENST00000588857 OGDHQ02218 1023 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 WHAMMP3Q1A5X7 153 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 NIPA2Q8N8Q9 360 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 SPPL2BQ8TCT7 592 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 TIFAQ96CG3 184 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 TTYH1Q9H313 450 aaPredicted RBP23.36■■□□□ 1.33
ATG4D-209ENST00000588857 CNGB3Q9NQW8 809 aa23.36■■□□□ 1.33
ATG4D-209ENST00000588857 CCDC66A2RUB6 948 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RIOK3O14730 519 aaKnown RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 SART1O43290 800 aaKnown RBP23.35■■□□□ 1.33
ATG4D-209ENST00000588857 LINC00271P0C7V0 271 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 PDGFRAP16234 1089 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 DESP17661 470 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 OR1D2P34982 312 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 NDUFV1P49821 464 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 ZNF252P-AS1Q0IIN9 211 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 TAF5Q15542 800 aa23.35■■□□□ 1.33
ATG4D-209ENST00000588857 RNF19BQ6ZMZ0 732 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms