RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ADORA2BP29275 332 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 ZNF132P52740 706 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 PPP1R26Q5T8A7 1209 aaPredicted RBP21.31■■□□□ 1
ATG4D-208ENST00000588667 DPY19L2P1Q6NXN4 242 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 ZDHHC14Q8IZN3 488 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 RBBP8NLQ8NC74 664 aaPredicted RBP21.31■■□□□ 1
ATG4D-208ENST00000588667 STKLD1Q8NE28 680 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 SYN2Q92777 582 aaPredicted RBP21.31■■□□□ 1
ATG4D-208ENST00000588667 FGF13Q92913 245 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 TCEAL4Q96EI5 215 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 NLRC4Q9NPP4 1024 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 KIAA1257Q9ULG3 409 aa21.31■■□□□ 1
ATG4D-208ENST00000588667 LRRC53A6NM62 1247 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 CCP110O43303 1012 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 RFX1P22670 979 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 SSTR3P32745 418 aaPredicted RBP21.3■■□□□ 1
ATG4D-208ENST00000588667 CDK17Q00537 523 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 MTMR3Q13615 1198 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 SGO2Q562F6 1265 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 DENND5BQ6ZUT9 1274 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 NPAS3Q8IXF0 933 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 ING5Q8WYH8 240 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 MYRFLQ96LU7 910 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 CSNK1G1Q9HCP0 422 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 KCND1Q9NSA2 647 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 EHD2Q9NZN4 543 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 EPS15L1Q9UBC2 864 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 UXTQ9UBK9 157 aaPredicted RBP21.3■■□□□ 1
ATG4D-208ENST00000588667 MYO6Q9UM54 1294 aa21.3■■□□□ 1
ATG4D-208ENST00000588667 SOWAHDA6NJG2 315 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 MOSPD3O75425 235 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 VDRP11473 427 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 CD19P15391 556 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 CEBPBP17676 345 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 GABRR2P28476 465 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 CDC25CP30307 473 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 GAREM2Q75VX8 874 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SHKBP1Q8TBC3 707 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SHC3Q92529 594 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 GCNAQ96QF7 691 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SPAG5Q96R06 1193 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 KCNK16Q96T55 309 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SMOQ99835 787 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 IL21Q9HBE4 155 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 DNAJC12Q9UKB3 198 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 MAGED2Q9UNF1 606 aaPredicted RBP21.29■■□□□ 1
ATG4D-208ENST00000588667 ANAPC1Q9H1A4 1944 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 A0A1W2PRU2 124 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 LAMP2P13473 410 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 KRT5P13647 590 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 NPR3P17342 541 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 ARHGAP44Q17R89 818 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SFMBT2Q5VUG0 894 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 WDR59Q6PJI9 974 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 CLEC20AQ6ZU45 233 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 C17orf53Q8N3J3 647 aaPredicted RBP21.29■■□□□ 1
ATG4D-208ENST00000588667 ZMIZ2Q8NF64 920 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 TTLL2Q9BWV7 592 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 CD320Q9NPF0 282 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 SPTLC3Q9NUV7 552 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 GDE1Q9NZC3 331 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 FHOD1Q9Y613 1164 aa21.29■■□□□ 1
ATG4D-208ENST00000588667 NRG2O14511 850 aaPredicted RBP21.28■■□□□ 1
ATG4D-208ENST00000588667 BEST1O76090 585 aa21.28■■□□□ 1
ATG4D-208ENST00000588667 MAP3K7CLP57077 242 aa21.28■■□□□ 1
ATG4D-208ENST00000588667 E4F1Q66K89 784 aaPredicted RBP21.28■■□□□ 1
ATG4D-208ENST00000588667 CCAR2Q8N163 923 aaKnown RBP21.28■■□□□ 1
ATG4D-208ENST00000588667 DUSP16Q9BY84 665 aa21.28■■□□□ 1
ATG4D-208ENST00000588667 PNPLA8Q9NP80 782 aa21.28■■□□□ 1
ATG4D-208ENST00000588667 AJAP1Q9UKB5 411 aaPredicted RBP21.28■■□□□ 1
ATG4D-208ENST00000588667 MYO16Q9Y6X6 1858 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 O00370 1275 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 ZSCAN12O43309 604 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 RTN3O95197 1032 aaPredicted RBP21.27■■□□□ 1
ATG4D-208ENST00000588667 GJA1P17302 382 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 STILQ15468 1287 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 TEAD2Q15562 447 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 GOLGA7BQ2TAP0 167 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 RAD9BQ6WBX8 426 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 FMNL3Q8IVF7 1028 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 NUP93Q8N1F7 819 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 ANKRD52Q8NB46 1076 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 COL25A1Q9BXS0 654 aaPredicted RBP21.27■■□□□ 1
ATG4D-208ENST00000588667 ATXN3LQ9H3M9 355 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 TSPAN16Q9UKR8 245 aa21.27■■□□□ 1
ATG4D-208ENST00000588667 NUP210Q8TEM1 1887 aaPredicted RBP21.27■■□□□ 1
ATG4D-208ENST00000588667 TNFRSF10BO14763 440 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 F11P03951 625 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 SLC5A3P53794 718 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 USP46P62068 366 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 RAPGEF1Q13905 1077 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 ARHGAP15Q53QZ3 475 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 TMEM150AQ86TG1 271 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 CCDC170Q8IYT3 715 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 TFAP2BQ92481 460 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 CHP1Q99653 195 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 RRAGDQ9NQL2 400 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-208ENST00000588667 HESX1Q9UBX0 185 aa21.26■□□□□ 0.99
ATG4D-208ENST00000588667 BCAT1P54687 386 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms