RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MEA1Q16626 185 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 RAB41Q5JT25 222 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ITIH5Q86UX2 942 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF677Q86XU0 584 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 TC2NQ8N9U0 490 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 C1orf131Q8NDD1 294 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 OR8K1Q8NGG5 319 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 LHX5Q9H2C1 402 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 IL21Q9HBE4 155 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ABHD10Q9NUJ1 306 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 IL37Q9NZH6 218 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ASB3Q9Y575 518 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF638Q14966 1978 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 MBTPS2O43462 519 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 MOSPD3O75425 235 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CYP1A1P04798 512 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 TPM1P09493 284 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 MYL4P12829 197 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 GJA1P17302 382 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CDH5P33151 784 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 RPL34P49207 117 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 PGFP49763 221 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 KIF11P52732 1056 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 EPHA5P54756 1037 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC8A3P57103 927 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 NOMO3P69849 1222 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 LEXMQ3ZCV2 418 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 PABPC1LQ4VXU2 614 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 TDRD12Q587J7 1177 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CES5AQ6NT32 575 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 POTEHQ6S545 545 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 GAREM2Q75VX8 874 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 TMEM150AQ86TG1 271 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CPA5Q8WXQ8 436 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 KCTD13Q8WZ19 329 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 SUSD6Q92537 303 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 MYRFLQ96LU7 910 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CEP295NLQ96MC4 621 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 CPXM1Q96SM3 734 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 WDR6Q9NNW5 1121 aaKnown RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 COG5Q9UP83 839 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 USP15Q9Y4E8 981 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 USP3Q9Y6I4 520 aa11.29□□□□□ -0.6
SMARCA4-213ENST00000587988 FAM92AA1XBS5 289 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 DDX3XO00571 662 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TADA3O75528 432 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 RTN3O95197 1032 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 F11P03951 625 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 SERPING1P05155 500 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 UNGP13051 313 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 LCP1P13796 627 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TNFAIP3P21580 790 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 YWHAQP27348 245 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 GABRR2P28476 465 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TKTL1P51854 596 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 ADIGQ0VDE8 80 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TAF10Q12962 218 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 PDCLQ13371 301 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 SMAD4Q13485 552 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CLEC16AQ2KHT3 1053 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 C2CD6Q53TS8 623 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 NAA35Q5VZE5 725 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CNGA4Q8IV77 575 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TMEM35BQ8NCS4 154 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC30A5Q8TAD4 765 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CLEC4CQ8WTT0 213 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 FBXO32Q969P5 355 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TRMT2BQ96GJ1 504 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 HSFY1Q96LI6 401 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CHP1Q99653 195 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 ULBP1Q9BZM6 244 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 LRRC4Q9HBW1 653 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 TAS2R14Q9NYV8 317 aa11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 CHORDC1Q9UHD1 332 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-213ENST00000587988 OBSL1O75147 1896 aa11.27□□□□□ -0.6
SMARCA4-213ENST00000587988 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms