RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 SURF1Q15526 300 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 MAPRE1Q15691 268 aaKnown RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 SNRNP35Q16560 246 aaKnown RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 WDR72Q3MJ13 1102 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 PLA2G2CQ5R387 149 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 EMC10Q5UCC4 262 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 PSAPL1Q6NUJ1 521 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 VSTM1Q6UX27 236 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 DPH6Q7L8W6 267 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 LIMS2Q7Z4I7 341 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 WDR49Q8IV35 697 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ADGRG2Q8IZP9 1017 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 FRMD1Q8N878 549 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 USP33Q8TEY7 942 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 RLN3Q8WXF3 142 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 ZNF516Q92618 1163 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ACDQ96AP0 544 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ERLEC1Q96DZ1 483 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 SPATA17Q96L03 361 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 FNBP1Q96RU3 617 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ZNF518BQ9C0D4 1074 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 BLZF1Q9H2G9 400 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 VPS45Q9NRW7 570 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 AGPAT3Q9NRZ7 376 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 TMEM30AQ9NV96 361 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 CFAP97Q9P2B7 532 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 EBF1Q9UH73 591 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 CHORDC1Q9UHD1 332 aaPredicted RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 ANGPTL2Q9UKU9 493 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ARHGAP26Q9UNA1 814 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 PCDHGA5Q9Y5G8 931 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 CPQQ9Y646 472 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ZNF638Q14966 1978 aaKnown RBP6.84□□□□□ -1.32
SDF2-205ENST00000587629 ACACBO00763 2458 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 BCLAF3A2AJT9 711 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 A8MXQ7 604 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 PATE3B3GLJ2 98 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TRIM66O15016 1216 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 KIAA0391O15091 583 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 SPTLC2O15270 562 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TGFB1I1O43294 461 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 STX6O43752 255 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 PHACTR2O75167 634 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 KCNK5O95279 499 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 KLF8O95600 359 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 MBL2P11226 248 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 HNRNPLP14866 589 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDF2-205ENST00000587629 BCKDHBP21953 392 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 AFMP43652 599 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 DHPSP49366 369 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 CASP4P49662 377 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 LIMK1P53667 647 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 CDH8P55286 799 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 MYL6P60660 151 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 CYP24A1Q07973 514 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TRPC3Q13507 836 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 DHCR24Q15392 516 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 E2F4Q16254 413 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 GAB4Q2WGN9 574 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 UAP1L1Q3KQV9 507 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 USP39Q53GS9 565 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 FAM26FQ5R3K3 315 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TDRD10Q5VZ19 366 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 RHBDF2Q6PJF5 856 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 ARMCX6Q7L4S7 300 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 EPM2AIP1Q7L775 607 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 C12orf40Q86WS4 652 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 ALLCQ8N6M5 410 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 NAT16Q8N8M0 369 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TXNDC5Q8NBS9 432 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 LINC00301Q8NCQ3 95 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 SCAMP5Q8TAC9 235 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 SPATA18Q8TC71 538 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 ZNF507Q8TCN5 953 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 PIGKQ92643 395 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 KCNK16Q96T55 309 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 MED10Q9BTT4 135 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 EDEM2Q9BV94 578 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 LSM14BQ9BX40 385 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 B3GNT5Q9BYG0 378 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TRIM9Q9C026 710 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 LRRC27Q9C0I9 530 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TNMDQ9H2S6 317 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 ZSCAN16Q9H4T2 348 aaPredicted RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 KIAA1586Q9HCI6 787 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 SLC39A2Q9NP94 309 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 KBTBD4Q9NVX7 518 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 BCCIPQ9P287 314 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDF2-205ENST00000587629 RALYQ9UKM9 306 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 LAMA1P25391 3075 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 TPRP12270 2363 aaKnown RBP6.83□□□□□ -1.32
SDF2-205ENST00000587629 OBSL1O75147 1896 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 ZFHX4Q86UP3 3567 aa6.83□□□□□ -1.32
SDF2-205ENST00000587629 DENND4CQ5VZ89 1909 aa6.82□□□□□ -1.32
SDF2-205ENST00000587629 CACNA1BQ00975 2339 aa6.82□□□□□ -1.32
SDF2-205ENST00000587629 KMT2BQ9UMN6 2715 aaPredicted RBP6.82□□□□□ -1.32
SDF2-205ENST00000587629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms