RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CEP85Q6P2H3 762 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 ANKRD16Q6P6B7 361 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 GLCCI1Q86VQ1 547 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 MTFMTQ96DP5 389 aaKnown RBP5.28□□□□□ -1.56
VMP1-205ENST00000587470 SLC46A1Q96NT5 459 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 TTYH3Q9C0H2 523 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
VMP1-205ENST00000587470 SERHLQ9NQF3 203 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 AASDHPPTQ9NRN7 309 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 IP6K2Q9UHH9 426 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 RIMS2Q9UQ26 1411 aa5.28□□□□□ -1.56
VMP1-205ENST00000587470 DHX57Q6P158 1386 aaKnown RBP5.28□□□□□ -1.56
VMP1-205ENST00000587470 RPGRIP1LQ68CZ1 1315 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 CCDC144AA2RUR9 1427 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 DCLK1O15075 740 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 SLC16A3O15427 465 aaKnown RBP5.27□□□□□ -1.57
VMP1-205ENST00000587470 JTBO76095 146 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 ONECUT2O95948 504 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 ALDH2P05091 517 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PDHA1P08559 390 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PF4V1P10720 104 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 JUPP14923 745 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PCSK6P29122 969 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 DCCP43146 1447 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PXNP49023 591 aaPredicted RBP5.27□□□□□ -1.57
VMP1-205ENST00000587470 PRELPP51888 382 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 LOXL3P58215 753 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 TFF2Q03403 129 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
VMP1-205ENST00000587470 LLGL1Q15334 1064 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 ATAT1Q5SQI0 421 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 WDR53Q7Z5U6 358 aaPredicted RBP5.27□□□□□ -1.57
VMP1-205ENST00000587470 UNC5CLQ8IV45 518 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PCSK9Q8NBP7 692 aaKnown RBP5.27□□□□□ -1.57
VMP1-205ENST00000587470 DDB2Q92466 427 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 HOOK2Q96ED9 719 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 C1GALT1C1Q96EU7 318 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 MOGAT1Q96PD6 335 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 SLC29A3Q9BZD2 475 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 FLRT1Q9NZU1 646 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PCDHA6Q9UN73 950 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 SH2B3Q9UQQ2 575 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PLEKHM1Q9Y4G2 1056 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 MYO5BQ9ULV0 1848 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 PLEKHG1Q9ULL1 1385 aa5.27□□□□□ -1.57
VMP1-205ENST00000587470 ADGRF5Q8IZF2 1346 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 ADAMTS13Q76LX8 1427 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 LINC01548A6NM66 108 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 OFD1O75665 1012 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 NCLP19338 710 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 PPIFP30405 207 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 KCNJ5P48544 419 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 ATXN1P54253 815 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 GRM1Q13255 1194 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 EZH2Q15910 746 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 AARS2Q5JTZ9 985 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 PAPD7Q5XG87 772 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 GRAMD1CQ8IYS0 662 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 TBC1D5Q92609 795 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 NAF1Q96HR8 494 aaKnown RBP5.26□□□□□ -1.57
VMP1-205ENST00000587470 GPATCH3Q96I76 525 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 SIN3AQ96ST3 1273 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 CGRRF1Q99675 332 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 PTDSS2Q9BVG9 487 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 SERGEFQ9UGK8 458 aa5.26□□□□□ -1.57
VMP1-205ENST00000587470 BRWD3Q6RI45 1802 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 CHD4Q14839 1912 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 NEXMIFQ5QGS0 1516 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 ABLIM3O94929 683 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 UNC5CO95185 931 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 GRPP07492 148 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 IL6RP08887 468 aaPredicted RBP5.25□□□□□ -1.57
VMP1-205ENST00000587470 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
VMP1-205ENST00000587470 SRSF7Q16629 238 aaKnown RBP eCLIP5.25□□□□□ -1.57
VMP1-205ENST00000587470 SLC29A4Q7RTT9 530 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 MAVSQ7Z434 540 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 FANCBQ8NB91 859 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 SMG7Q92540 1137 aaKnown RBP5.25□□□□□ -1.57
VMP1-205ENST00000587470 TYW1Q9NV66 732 aaKnown RBP5.25□□□□□ -1.57
VMP1-205ENST00000587470 SERTAD3Q9UJW9 196 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 SSX2IPQ9Y2D8 614 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 STXBP5LQ9Y2K9 1186 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 PIK3R4Q99570 1358 aa5.25□□□□□ -1.57
VMP1-205ENST00000587470 MST1RQ04912 1400 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 ANKRD62A6NC57 917 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 QSOX1O00391 747 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 ALDH1L1O75891 902 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 THP07101 528 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 HSPA6P17066 643 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 CYP2C18P33260 490 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 LIPAP38571 399 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 VIPR2P41587 438 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 EEFSECP57772 596 aaKnown RBP5.24□□□□□ -1.57
VMP1-205ENST00000587470 LILRA4P59901 499 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 E2F2Q14209 437 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 FGL2Q14314 439 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 TMEM119Q4V9L6 283 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 TREML2Q5T2D2 321 aa5.24□□□□□ -1.57
VMP1-205ENST00000587470 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms