RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PCDH15Q96QU1 1955 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 PLXND1Q9Y4D7 1925 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 GOLGA6L22H0YM25 854 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 PLA2G4BP0C869 781 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 CHRM1P11229 460 aaPredicted RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 KIR2DL1P43626 348 aaPredicted RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 PDE6CP51160 858 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 ZXDBP98169 803 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 IL17AQ16552 155 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SLC39A4Q6P5W5 647 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SPATA2LQ8IUW3 424 aaPredicted RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 SYT2Q8N9I0 419 aaPredicted RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 TRIML1Q8N9V2 468 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 ERLEC1Q96DZ1 483 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 CDK5RAP3Q96JB5 506 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 PNMA5Q96PV4 448 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 ACBD6Q9BR61 282 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 SMPD4Q9NXE4 827 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 DDX43Q9NXZ2 648 aaKnown RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 KCND2Q9NZV8 630 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 CALCOCO1Q9P1Z2 691 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 GTF3C4Q9UKN8 822 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 L1RE1Q9UN81 338 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 PCDHB6Q9Y5E3 794 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 ATP6V1DQ9Y5K8 247 aa9.16□□□□□ -0.94
SDF2-204ENST00000587338 GOLGA4Q13439 2230 aaKnown RBP9.16□□□□□ -0.94
SDF2-204ENST00000587338 HELZP42694 1942 aaKnown RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 IGHV1OR15-9A0A0B4J2B8 117 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 TISP43B9A030 160 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 HCRTO43612 131 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 HUS1O60921 280 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ADH1CP00326 375 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 PRB1P04280 392 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ADH5P11766 374 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 HOXB2P14652 356 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 GABRG2P18507 467 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 EIF2DP41214 584 aaKnown RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 PNPLA4P41247 253 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 GRIA2P42262 883 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 WASP42768 502 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 MYL7Q01449 175 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 NFKBIBQ15653 356 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 CFAP221Q4G0U5 840 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 DTHD1Q6ZMT9 781 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 TOGARAM2Q6ZUX3 1019 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 SLC41A1Q8IVJ1 513 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 RGL4Q8IZJ4 473 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ADGRG2Q8IZP9 1017 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 MYCT1Q8N699 235 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ZNF513Q8N8E2 541 aaPredicted RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 CRELD1Q96HD1 420 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 PKMYT1Q99640 499 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 REEP2Q9BRK0 252 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ZHX3Q9H4I2 956 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 ZSCAN16Q9H4T2 348 aaPredicted RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 TRPM5Q9NZQ8 1165 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 CFAP97Q9P2B7 532 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 CYP8B1Q9UNU6 501 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 CPQQ9Y646 472 aa9.15□□□□□ -0.94
SDF2-204ENST00000587338 MYO18AQ92614 2054 aaKnown RBP9.15□□□□□ -0.94
SDF2-204ENST00000587338 ANAPC1Q9H1A4 1944 aa9.15□□□□□ -0.95
SDF2-204ENST00000587338 HECTD1Q9ULT8 2610 aa9.15□□□□□ -0.95
SDF2-204ENST00000587338 PLXNB3Q9ULL4 1909 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 A0A1W2PQD8 194 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 TBC1D3BA6NDS4 549 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ANKRD63C9JTQ0 380 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 LAD1O00515 517 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ZBTB24O43167 697 aaPredicted RBP9.14□□□□□ -0.95
SDF2-204ENST00000587338 GJB3O75712 270 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 FAM13AO94988 1023 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ABL1P00519 1130 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ITGB3P05106 788 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 SCP2P22307 547 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 POLR2BP30876 1174 aaKnown RBP9.14□□□□□ -0.95
SDF2-204ENST00000587338 PRPHP41219 470 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 TNFRSF4P43489 277 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 TFAMQ00059 246 aaKnown RBP9.14□□□□□ -0.95
SDF2-204ENST00000587338 C19orf57Q0VDD7 668 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 GRIK2Q13002 908 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ARSHQ5FYA8 562 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 HYIQ5T013 277 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 RHBDF2Q6PJF5 856 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 TRMT11Q7Z4G4 463 aaKnown RBP9.14□□□□□ -0.95
SDF2-204ENST00000587338 SLCO6A1Q86UG4 719 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 GPBP1Q86WP2 473 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 ADGRF2Q8IZF7 708 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 TMEM86AQ8N2M4 240 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 SETD7Q8WTS6 366 aaKnown RBP9.14□□□□□ -0.95
SDF2-204ENST00000587338 FUBP3Q96I24 572 aaKnown RBP eCLIP9.14□□□□□ -0.95
SDF2-204ENST00000587338 RNF38Q9H0F5 515 aa9.14□□□□□ -0.95
SDF2-204ENST00000587338 FAM124BQ9H5Z6 455 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms