RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 MCF2P10911 925 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 KCNE1P15382 129 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 ANXA13P27216 316 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 NMT1P30419 496 aaKnown RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 HNRNPH3P31942 346 aaKnown RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 EPHA5P54756 1037 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 ADKP55263 362 aaKnown RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 KRT83P78385 493 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 STRN3Q13033 797 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 MEA1Q16626 185 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 N4BP2L1Q5TBK1 243 aaPredicted RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 CEP135Q66GS9 1140 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 TCEAL6Q6IPX3 200 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 GAREM2Q75VX8 874 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 CEP68Q76N32 757 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 HAUS6Q7Z4H7 955 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 YAF2Q8IY57 180 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 FAM186BQ8IYM0 893 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 GLIS3Q8NEA6 775 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 CSGALNACT1Q8TDX6 532 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 TCEAL3Q969E4 200 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 C16orf45Q96MC5 204 aaPredicted RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 FIZ1Q96SL8 496 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 FAM126AQ9BYI3 521 aaPredicted RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 TTYH3Q9C0H2 523 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 ARRDC1-AS1Q9H2J1 176 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 KIAA1586Q9HCI6 787 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 PLCB1Q9NQ66 1216 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 AGPAT3Q9NRZ7 376 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 TOPORSQ9NS56 1045 aaPredicted RBP8.36□□□□□ -1.07
VMP1-204ENST00000587259 SLC38A7Q9NVC3 462 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 WDR70Q9NW82 654 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 MYO1AQ9UBC5 1043 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 SIK3Q9Y2K2 1263 aa8.36□□□□□ -1.07
VMP1-204ENST00000587259 CHD6Q8TD26 2715 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TTC26A0AVF1 554 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 ANTXRLA6NF34 631 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 OTOL1A6NHN0 477 aaPredicted RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 TGFB1I1O43294 461 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 EXOC3O60645 756 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 MICAL2O94851 1124 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TNNT1P13805 278 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 SDHBP21912 280 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 CTHP32929 405 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 MATR3P43243 847 aaKnown RBP eCLIP8.35□□□□□ -1.07
VMP1-204ENST00000587259 NRLP54845 237 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 YWHAHQ04917 246 aaPredicted RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 KCNH2Q12809 1159 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 CSRP2Q16527 193 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 AASDHQ4L235 1098 aaPredicted RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 DCAF17Q5H9S7 520 aaPredicted RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 GPR158Q5T848 1215 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TPGS2Q68CL5 300 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TRIM68Q6AZZ1 485 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 GBP6Q6ZN66 633 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 ZNF662Q6ZS27 426 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 RTL10Q7L3V2 364 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 KBTBD6Q86V97 674 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 SPEM1Q8N4L4 309 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 XXYLT1Q8NBI6 393 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 OR10T2Q8NGX3 314 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 RIN3Q8TB24 985 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 DEPDC1BQ8WUY9 529 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 CPLX3Q8WVH0 158 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 CHFRQ96EP1 664 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 FAM81BQ96LP2 452 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 FGFBP2Q9BYJ0 223 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TSGA10Q9BZW7 698 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 IKZF4Q9H2S9 585 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 ATXN3LQ9H3M9 355 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 MMRN2Q9H8L6 949 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 TRPV4Q9HBA0 871 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 DMAC2Q9NW81 257 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 PPP2R2CQ9Y2T4 447 aa8.35□□□□□ -1.07
VMP1-204ENST00000587259 BZW2Q9Y6E2 419 aaKnown RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 CNOT1A5YKK6 2376 aaKnown RBP8.35□□□□□ -1.07
VMP1-204ENST00000587259 ATG2BQ96BY7 2078 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 PDCD11Q14690 1871 aaKnown RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 KIF26AQ9ULI4 1882 aaPredicted RBP8.34□□□□□ -1.07
VMP1-204ENST00000587259 ATP8B3O60423 1300 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SSU72P8A0A1W2PR75 194 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 MYBPHLA2RUH7 354 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 MTMR11A4FU01 709 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 LACTBL1A8MY62 500 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 DCLK1O15075 740 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 CHADO15335 359 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 AKAP3O75969 853 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 SPINK2P20155 84 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 GARTP22102 1010 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 GABRR2P28476 465 aa8.34□□□□□ -1.07
VMP1-204ENST00000587259 RPL9P32969 192 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms