RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 IRX4P78413 519 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 MDH1BQ5I0G3 518 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 EMC10Q5UCC4 262 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 DAB2IPQ5VWQ8 1189 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 TDRD10Q5VZ19 366 aaKnown RBP15.42■□□□□ 0.06
SDF2-202ENST00000585428 ANO7Q6IWH7 933 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 HS2ST1Q7LGA3 356 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 IL17RCQ8NAC3 791 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 RDH13Q8NBN7 331 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 PNKPQ96T60 521 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 TRIM9Q9C026 710 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 LRRC27Q9C0I9 530 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 TNMDQ9H2S6 317 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 SNX25Q9H3E2 840 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 CPQQ9Y646 472 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 ATG2BQ96BY7 2078 aa15.42■□□□□ 0.06
SDF2-202ENST00000585428 TCHHQ07283 1943 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 PATE3B3GLJ2 98 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 EIF3DO15371 548 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDF2-202ENST00000585428 STAU1O95793 577 aaKnown RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 PROS1P07225 676 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 CEACAM1P13688 526 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 P2RY2P41231 377 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 TNFRSF4P43489 277 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 NASPP49321 788 aaPredicted RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 PSMD6Q15008 389 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 SNRNP35Q16560 246 aaKnown RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 WDR72Q3MJ13 1102 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 HSF5Q4G112 596 aaPredicted RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 LINC00301Q8NCQ3 95 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 OR6B3Q8NGW1 331 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 B3GNT5Q9BYG0 378 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 GZF1Q9H116 711 aaPredicted RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 DPEP3Q9H4B8 488 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 ZSCAN16Q9H4T2 348 aaPredicted RBP15.41■□□□□ 0.06
SDF2-202ENST00000585428 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 IL37Q9NZH6 218 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 MTMR6Q9Y217 621 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 EML5Q05BV3 1969 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 OBSL1O75147 1896 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 FRYQ5TBA9 3013 aa15.41■□□□□ 0.06
SDF2-202ENST00000585428 E2F8A0AVK6 867 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 SGK1O00141 431 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 KAT7O95251 611 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 ABL1P00519 1130 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 DLATP10515 647 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 TNNI1P19237 187 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 CSRP1P21291 193 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 GRIA2P42262 883 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 NOVA1P51513 510 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 CYP24A1Q07973 514 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 SH3PXD2AQ5TCZ1 1133 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 SNX30Q5VWJ9 437 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 C12orf40Q86WS4 652 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 NUP93Q8N1F7 819 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 PHTF2Q8N3S3 785 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 ALLCQ8N6M5 410 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 FRMD1Q8N878 549 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 TXNDC5Q8NBS9 432 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 RLN3Q8WXF3 142 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 INTS4Q96HW7 963 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 FNBP1Q96RU3 617 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 DUSP9Q99956 384 aaKnown RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 C7orf25Q9BPX7 421 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 ZNF518BQ9C0D4 1074 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 XYLT2Q9H1B5 865 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 CUEDC2Q9H467 287 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 SMPD4Q9NXE4 827 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 CFAP97Q9P2B7 532 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 TBC1D14Q9P2M4 693 aa15.4■□□□□ 0.06
SDF2-202ENST00000585428 CHORDC1Q9UHD1 332 aaPredicted RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 EVLQ9UI08 416 aaPredicted RBP15.4■□□□□ 0.06
SDF2-202ENST00000585428 CHD8Q9HCK8 2581 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 CLDN5O00501 218 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 TNFRSF10BO14763 440 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 ADAM23O75077 832 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 ALDH1A2O94788 518 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 KLF8O95600 359 aaPredicted RBP15.39■□□□□ 0.05
SDF2-202ENST00000585428 YWHAQP27348 245 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 TIE1P35590 1138 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 MYL6P60660 151 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 AMPD3Q01432 767 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 EHHADHQ08426 723 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 SPDYCQ5MJ68 293 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 PAQR9Q6ZVX9 377 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 CYP2U1Q7Z449 544 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 DDX42Q86XP3 938 aaKnown RBP eCLIP15.39■□□□□ 0.05
SDF2-202ENST00000585428 SCFD1Q8WVM8 642 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 OVCA2Q8WZ82 227 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 OTUB2Q96DC9 234 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 ZFRQ96KR1 1074 aaKnown RBP15.39■□□□□ 0.05
SDF2-202ENST00000585428 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 KCNK16Q96T55 309 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 ELOVL4Q9GZR5 314 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 TMEM9BQ9NQ34 198 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 TMEM74BQ9NUR3 256 aa15.39■□□□□ 0.05
SDF2-202ENST00000585428 MBD1Q9UIS9 605 aaPredicted RBP15.39■□□□□ 0.05
SDF2-202ENST00000585428 A8MXQ7 604 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms