RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MIS12Q9H081 205 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 WDR6Q9NNW5 1121 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 ST7Q9NRC1 585 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 TMEM30AQ9NV96 361 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 SEPT11Q9NVA2 429 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 HCFC1R1Q9NWW0 138 aa15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 DNMT3BQ9UBC3 853 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 NOCTQ9UK39 431 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 MRPS23Q9Y3D9 190 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-209ENST00000585335 MBTPS2O43462 519 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 MFAP3LO75121 409 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 MMEP08473 750 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 PRKCIP41743 596 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 MRE11P49959 708 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 EPHA5P54756 1037 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 PPP1R2P3Q6NXS1 205 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 IRF2BP2Q7Z5L9 587 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 PASD1Q8IV76 773 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 IPO4Q8TEX9 1081 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 SLC20A1Q8WUM9 679 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 SLC35F5Q8WV83 523 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 KCTD13Q8WZ19 329 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 OVCA2Q8WZ82 227 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 SUSD6Q92537 303 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 FBXO32Q969P5 355 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 MYRFLQ96LU7 910 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 AGPAT1Q99943 283 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 TTLL2Q9BWV7 592 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 CYLDQ9NQC7 956 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
SCAMP4-209ENST00000585335 HHLA1C9JL84 531 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 FBXO21O94952 628 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 SERPING1P05155 500 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 HMGA1P17096 107 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 TNFAIP3P21580 790 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 GABRR2P28476 465 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 GPD2P43304 727 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 KIF11P52732 1056 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 MTMR3Q13615 1198 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 TMC8Q8IU68 726 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 ARHGAP18Q8N392 663 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 STKLD1Q8NE28 680 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 ATXN2LQ8WWM7 1075 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 DDX1Q92499 740 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 MRPS31Q92665 395 aaKnown RBP15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 DNAJC7Q99615 494 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 ATXN3LQ9H3M9 355 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 PRDM6Q9NQX0 595 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 TRPM5Q9NZQ8 1165 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 IMPACTQ9P2X3 320 aa15.37■□□□□ 0.05
SCAMP4-209ENST00000585335 PATJQ8NI35 1801 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TULP2O00295 520 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 SART1O43290 800 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 LCP1P13796 627 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 RGS7P49802 495 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TKTL1P51854 596 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 NTHL1P78549 312 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TFF2Q03403 129 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TAF10Q12962 218 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TBX2Q13207 712 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 PDCLQ13371 301 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 RAB41Q5JT25 222 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 GET4Q7L5D6 327 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 OTOP3Q7RTS5 596 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 GPRIN1Q7Z2K8 1008 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 C1orf131Q8NDD1 294 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 SCAMP5Q8TAC9 235 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 GOLGA1Q92805 767 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 ACSF2Q96CM8 615 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 PPP1R13BQ96KQ4 1090 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 POMKQ9H5K3 350 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 SLITRK6Q9H5Y7 841 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 HAUS4Q9H6D7 363 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 ZNF334Q9HCZ1 680 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 CNGB3Q9NQW8 809 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 TLR8Q9NR97 1041 aaKnown RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 ABHD10Q9NUJ1 306 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 IL37Q9NZH6 218 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 SCML2Q9UQR0 700 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 NR2E1Q9Y466 385 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 ZFP37Q9Y6Q3 630 aaPredicted RBP15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 NCANO14594 1321 aa15.36■□□□□ 0.05
SCAMP4-209ENST00000585335 A0A1W2PRU2 124 aa15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 ZBED1O96006 694 aa15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 ABL1P00519 1130 aa15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 CFHP08603 1231 aa15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 HNRNPH3P31942 346 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 CDH5P33151 784 aaPredicted RBP15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 NSFP46459 744 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-209ENST00000585335 PSEN1P49768 467 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms