RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ATAD1Q8NBU5 361 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 KREMEN2Q8NCW0 462 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 C3orf20Q8ND61 904 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 GDPD5Q8WTR4 605 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 CPA5Q8WXQ8 436 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 AUTS2Q8WXX7 1259 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 RFFLQ8WZ73 363 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 OVCA2Q8WZ82 227 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 CASP10Q92851 521 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ZNF653Q96CK0 615 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 PGLYRP2Q96PD5 576 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 CDK5RAP1Q96SZ6 601 aaKnown RBP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 PCDHB18PQ96TA0 734 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 SMOQ99835 787 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 TMLHEQ9NVH6 421 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ASNSD1Q9NWL6 643 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 ZMYM5Q9UJ78 669 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 NENFQ9UMX5 172 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 INSL5Q9Y5Q6 135 aa13.62□□□□□ -0.23
TRIM47-202ENST00000585333 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
TRIM47-202ENST00000585333 TMCO5BA8MYB1 307 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 PJA2O43164 708 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 DNAJB1P25685 340 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 CLCN4P51793 760 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 TKTL1P51854 596 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 GALCP54803 685 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 TCEAL1Q15170 157 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 DUSP6Q16828 381 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 RAB41Q5JT25 222 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 RSPO2Q6UXX9 243 aaPredicted RBP13.61□□□□□ -0.23
TRIM47-202ENST00000585333 MMS22LQ6ZRQ5 1243 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 PALB2Q86YC2 1186 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 RNF10Q8N5U6 811 aaKnown RBP13.61□□□□□ -0.23
TRIM47-202ENST00000585333 TRMT2BQ96GJ1 504 aaKnown RBP13.61□□□□□ -0.23
TRIM47-202ENST00000585333 GCNAQ96QF7 691 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 C11orf70Q9BRQ4 267 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 SELENOOQ9BVL4 669 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 RRN3Q9NYV6 651 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
TRIM47-202ENST00000585333 ZKSCAN5Q9Y2L8 839 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 PPP2R2CQ9Y2T4 447 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 YIPF1Q9Y548 306 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 NCANO14594 1321 aa13.61□□□□□ -0.23
TRIM47-202ENST00000585333 HIDE1A8MVS5 230 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 E5RJQ4 531 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ADAM12O43184 909 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 HSF2BPO75031 334 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 CLASP2O75122 1294 aaKnown RBP13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ZBED1O96006 694 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 TUBB4AP04350 444 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 C8AP07357 584 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ABCB4P21439 1286 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 YWHAQP27348 245 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 SLC5A3P53794 718 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ADIGQ0VDE8 80 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 CAMK1Q14012 370 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 MTF1Q14872 753 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 PTPN20Q4JDL3 420 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 OR6B2Q6IFH4 312 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 PMF1Q6P1K2 205 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 DCUN1D2Q6PH85 259 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 MON1AQ86VX9 555 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 WDTC1Q8N5D0 677 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 STKLD1Q8NE28 680 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ALS2CR12Q96Q35 445 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 CPXM1Q96SM3 734 aa13.6□□□□□ -0.23
TRIM47-202ENST00000585333 ZMYND10O75800 440 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 CALCAP01258 141 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 ERBB2P04626 1255 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 CYP1A2P05177 515 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 KRT3P12035 628 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 HOXB8P17481 243 aaPredicted RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 PFKLP17858 780 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 IRS1P35568 1242 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 ARHGAP25P42331 645 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 HADHBP55084 474 aaKnown RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 MRPS5P82675 430 aaKnown RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SLC6A3Q01959 620 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 MTA1Q13330 715 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 ACAP1Q15027 740 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 FAM102AQ5T9C2 384 aaPredicted RBP13.59□□□□□ -0.23
TRIM47-202ENST00000585333 PM20D1Q6GTS8 502 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SLC26A9Q7LBE3 791 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SYCE1Q8N0S2 351 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 PSMG2Q969U7 264 aa13.59□□□□□ -0.23
TRIM47-202ENST00000585333 MCRS1Q96EZ8 462 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms