RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TCRBV7S3A2A0A539 114 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 TMEM88BA6NKF7 163 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 ASAP2O43150 1006 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 OPA1O60313 960 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 MGEA5O60502 916 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 TBX18O95935 607 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 SULT1E1P49888 294 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.69
RFFL-212ENST00000584655 C9orf57Q5W0N0 161 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 TFAP2DQ7Z6R9 452 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 ZNF280BQ86YH2 543 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 AUTS2Q8WXX7 1259 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 APBA2Q99767 749 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 IP6K2Q9UHH9 426 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 BARX2Q9UMQ3 279 aaPredicted RBP10.77□□□□□ -0.69
RFFL-212ENST00000584655 NME7Q9Y5B8 376 aa10.77□□□□□ -0.69
RFFL-212ENST00000584655 MAP1BP46821 2468 aaKnown RBP10.77□□□□□ -0.69
RFFL-212ENST00000584655 CYP1A2P05177 515 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 THP07101 528 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 LIG3P49916 1009 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 GBE1Q04446 702 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ANKRD22Q5VYY1 191 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 WDR93Q6P2C0 686 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 OSTM1Q86WC4 334 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 RNF135Q8IUD6 432 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 AGR3Q8TD06 166 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ACTRT1Q8TDG2 376 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 GIPC2Q8TF65 315 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ULBP1Q9BZM6 244 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ETNK2Q9NVF9 386 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 DDIT4Q9NX09 232 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 MIF4GDA9UHW6 222 aaKnown RBP10.76□□□□□ -0.69
RFFL-212ENST00000584655 SLC26A4O43511 780 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 MED7O43513 233 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 CALB1P05937 261 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ZBTB48P10074 688 aaPredicted RBP10.76□□□□□ -0.69
RFFL-212ENST00000584655 MCF2P10911 925 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 CYP2F1P24903 491 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 TAF6P49848 677 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 SLC26A2P50443 739 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 TKTL1P51854 596 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 LILRA4P59901 499 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ITGA7Q13683 1181 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 MYBPC2Q14324 1141 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 SPOCD1Q6ZMY3 1216 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 P3H4Q92791 437 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 CDC42EP4Q9H3Q1 356 aaKnown RBP10.76□□□□□ -0.69
RFFL-212ENST00000584655 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 KCNG1Q9UIX4 513 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ATP11BQ9Y2G3 1177 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 SCINQ9Y6U3 715 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 CNTRLQ7Z7A1 2325 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 FOCADQ5VW36 1801 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ABLIM1O14639 778 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 MAP2K7O14733 419 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 KIAA0391O15091 583 aaKnown RBP10.76□□□□□ -0.69
RFFL-212ENST00000584655 CHRNA1P02708 482 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 TPH1P17752 444 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 GRIA1P42261 906 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 SLC8A3P57103 927 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 CENPCQ03188 943 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 C17orf99Q6UX52 265 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 C15orf39Q6ZRI6 1047 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 ENOSF1Q7L5Y1 443 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 RSPH3Q86UC2 560 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 LRRC45Q96CN5 670 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 FAF2Q96CS3 445 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 DDX27Q96GQ7 796 aaKnown RBP10.76□□□□□ -0.69
RFFL-212ENST00000584655 PEBP4Q96S96 227 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 SYT11Q9BT88 431 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 F5P12259 2224 aa10.76□□□□□ -0.69
RFFL-212ENST00000584655 PAPSS1O43252 624 aaPredicted RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 FAM189A1O60320 539 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 CILPO75339 1184 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 GPR32O75388 356 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 GOT1P17174 413 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 RTP1P59025 263 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 PALM2Q8IXS6 379 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 TTC9BQ8N6N2 239 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 CCDC185Q8N715 623 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 CCDC63Q8NA47 563 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 FAM71BQ8TC56 605 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 SMPD4Q9NXE4 827 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.75□□□□□ -0.698e-7■■□□□ 11.7
RFFL-212ENST00000584655 CCDC195A0A1B0GUA6 201 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 TMEM191CA6NGB0 347 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 ARL5CA6NH57 179 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 MYO1CO00159 1063 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 RASGRF2O14827 1237 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 CPB1P15086 417 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 C1QTNF8P60827 252 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 GHRHRQ02643 423 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 IFT88Q13099 833 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 COL9A2Q14055 689 aaPredicted RBP10.75□□□□□ -0.69
RFFL-212ENST00000584655 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
RFFL-212ENST00000584655 EMBQ6PCB8 327 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms