RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.26
SKA2-209ENST00000583976 HPDLQ96IR7 371 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 MRPL45Q9BRJ2 306 aaKnown RBP16.7■□□□□ 0.26
SKA2-209ENST00000583976 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 TMEM30AQ9NV96 361 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 HSPBP1Q9NZL4 362 aa16.7■□□□□ 0.26
SKA2-209ENST00000583976 USP17L7P0C7H9 530 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 DRD1P21728 446 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 BMP6P22004 513 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 LHX1P48742 406 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 MORC3Q14149 939 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 DMC1Q14565 340 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 GAB4Q2WGN9 574 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 SFTPA1Q8IWL2 248 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 CD101Q93033 1021 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 ATP2A3Q93084 1043 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 PCED1BQ96HM7 432 aa16.69■□□□□ 0.26
SKA2-209ENST00000583976 CCDC163A0A0D9SF12 145 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 PDXKO00764 312 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
SKA2-209ENST00000583976 ATG13O75143 517 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 PDGFRBP09619 1106 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
SKA2-209ENST00000583976 MAGEA11P43364 429 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 SEC13P55735 322 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 SNRPFP62306 86 aaKnown RBP16.68■□□□□ 0.26
SKA2-209ENST00000583976 PLK5Q496M5 336 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 PLA2G2CQ5R387 149 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 KLHL10Q6JEL2 608 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 GOLGA5Q8TBA6 731 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 SPATA18Q8TC71 538 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 TPSD1Q9BZJ3 242 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 LINC00597Q9H2U6 94 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 DPEP3Q9H4B8 488 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 SMPD4Q9NXE4 827 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
SKA2-209ENST00000583976 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
SKA2-209ENST00000583976 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 F8VP50 259 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 KIAA0391O15091 583 aaKnown RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 EXOC3O60645 756 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 APBB3O95704 486 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 TNNC2P02585 160 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 DLATP10515 647 aaKnown RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 WARSP23381 471 aaKnown RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 OPRD1P41143 372 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 STIM1Q13586 685 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 IL31Q6EBC2 164 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 SYT13Q7L8C5 426 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 WDR49Q8IV35 697 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 XXYLT1Q8NBI6 393 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 DUSP15Q9H1R2 295 aaPredicted RBP16.67■□□□□ 0.26
SKA2-209ENST00000583976 CDH9Q9ULB4 789 aa16.67■□□□□ 0.26
SKA2-209ENST00000583976 CEP295Q9C0D2 2601 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ASPMQ8IZT6 3477 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ZNF233A6NK53 670 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 LEFTY2O00292 366 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 AKAP3O75969 853 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 NR3C1P04150 777 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 CYP17A1P05093 508 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ZNF806P0C7X5 589 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 HDCP19113 662 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 GRIK1P39086 918 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 LIMK1P53667 647 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 AMPD2Q01433 879 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 IFRD2Q12894 506 aaPredicted RBP16.66■□□□□ 0.26
SKA2-209ENST00000583976 FBXO43Q4G163 708 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 STPG1Q5TH74 334 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ACDQ96AP0 544 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 MMS19Q96T76 1030 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 ZNF518BQ9C0D4 1074 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
SKA2-209ENST00000583976 TRAF3IP3Q9Y228 551 aa16.66■□□□□ 0.26
SKA2-209ENST00000583976 NUP205Q92621 2012 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 PPP1R3GB7ZBB8 358 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 CLDN5O00501 218 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 TM4SF5O14894 197 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
SKA2-209ENST00000583976 TCF3P15923 654 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 BCKDHBP21953 392 aa16.65■□□□□ 0.26
SKA2-209ENST00000583976 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
SKA2-209ENST00000583976 SNRNP35Q16560 246 aaKnown RBP16.65■□□□□ 0.26
SKA2-209ENST00000583976 ST3GAL2Q16842 350 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms