RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CCDC14Q49A88 953 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PIGWQ7Z7B1 504 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TBC1D1Q86TI0 1168 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PRPF39Q86UA1 669 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FBF1Q8TES7 1133 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DNAJB3Q8WWF6 145 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ACAP3Q96P50 834 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SERPINB12Q96P63 405 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TMEM109Q9BVC6 243 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 EURLQ9NYK6 297 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 IL1RAPL1Q9NZN1 696 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 XPO7Q9UIA9 1087 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NUMBLQ9Y6R0 609 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FSBPO95073 299 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MMP3P08254 477 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DARS2Q6PI48 645 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MICALCLQ6ZW33 695 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UNC5BQ8IZJ1 945 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ARRDC4Q8NCT1 418 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 OR6B3Q8NGW1 331 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCDC110Q8TBZ0 833 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CFAP36Q96G28 342 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LBHD1Q9BQE6 289 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ETNK2Q9NVF9 386 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SLC17A7Q9P2U7 560 aa11.19□□□□□ -0.62
CDK5RAP3-225ENST00000582482 H7C0C1 242 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SNX3O60493 162 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TAC1P20366 129 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 IL4RP24394 825 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GBP1P32455 592 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ATP5OP48047 213 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ENPEPQ07075 957 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 DPYSL3Q14195 570 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 HIF1AQ16665 826 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 C3orf62Q6ZUJ4 267 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TAOK1Q7L7X3 1001 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAM228AQ86W67 206 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FAM172AQ8WUF8 416 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MROH8Q9H579 483 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SLC5A4Q9NY91 659 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PAPSS1O43252 624 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TREHO43280 583 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RECQL4O94761 1208 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CPP00450 1065 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 AMHP03971 560 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KRT4P19013 534 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RBL1P28749 1068 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TKTP29401 623 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 YARSP54577 528 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CRADDP78560 199 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GBE1Q04446 702 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GRM1Q13255 1194 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FASTKD5Q7L8L6 764 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CATSPER4Q7RTX7 472 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TRABD2AQ86V40 505 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MPP5Q8N3R9 675 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 FITM2Q8N6M3 262 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PPTC7Q8NI37 304 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MCRS1Q96EZ8 462 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SAMD15Q9P1V8 674 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-225ENST00000582482 E2F8A0AVK6 867 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 KCNN4O15554 427 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 BEST1O76090 585 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 MCF2P10911 925 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 GPD1P21695 349 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ADRA1DP25100 572 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ABCD1P33897 745 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ELK3P41970 407 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 AP3M2P53677 418 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 RNASELQ05823 741 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ARMC9Q7Z3E5 817 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CCDC185Q8N715 623 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 PQLC3Q8N755 202 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NIPA2Q8N8Q9 360 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NAT8LQ8N9F0 302 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 ADAM32Q8TC27 787 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 CKAP2Q8WWK9 683 aa11.17□□□□□ -0.62
CDK5RAP3-225ENST00000582482 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms