RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MARCKSL1P49006 195 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 ERVK-21P61565 698 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 HTRA4P83105 476 aaPredicted RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 SLC6A3Q01959 620 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 GRIK3Q13003 919 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CALCOCO2Q13137 446 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 NNTQ13423 1086 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CASP8Q14790 479 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PTPN20Q4JDL3 420 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 DCAF12L1Q5VU92 463 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 WSCD1Q658N2 575 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 SLC24A5Q71RS6 500 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 GSTA5Q7RTV2 222 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 MAP7D3Q8IWC1 876 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.75□□□□□ -0.85
SS18-220ENST00000582092 FIBCD1Q8N539 461 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 NIPA2Q8N8Q9 360 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 C12orf29Q8N999 325 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 EIF1ADQ8N9N8 165 aaKnown RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 FNIP1Q8TF40 1166 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 STK32AQ8WU08 396 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 HDAC7Q8WUI4 952 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PPM1EQ8WY54 764 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 LRRC45Q96CN5 670 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 MCRS1Q96EZ8 462 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CCDC114Q96M63 670 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 OSBPL8Q9BZF1 889 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 TRIM7Q9C029 511 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CXCL16Q9H2A7 254 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 ZWILCHQ9H900 591 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CERS4Q9HA82 394 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 LRRC4Q9HBW1 653 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 CYLDQ9NQC7 956 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 GDF3Q9NR23 364 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 LMCD1Q9NZU5 365 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 MTRF1LQ9UGC7 380 aaKnown RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 NFU1Q9UMS0 254 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 L1RE1Q9UN81 338 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PCDHB7Q9Y5E2 793 aa9.75□□□□□ -0.85
SS18-220ENST00000582092 PRRC2BQ5JSZ5 2229 aaKnown RBP9.75□□□□□ -0.85
SS18-220ENST00000582092 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 LRRD1A4D1F6 860 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 LINC01553A4QN01 128 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 E5RJQ4 531 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 F8VP50 259 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 PIK3R2O00459 728 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 PTGESO14684 152 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 NDC80O14777 642 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 FSCN2O14926 492 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 TTI1O43156 1089 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 TRAPPC3O43617 180 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 OPA1O60313 960 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 B3GAT3O94766 335 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 ECEL1O95672 775 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 GLI1P08151 1106 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 LCP1P13796 627 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 CCDC130P13994 396 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 POU3F3P20264 500 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 RFC1P35251 1148 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 COILP38432 576 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 FNTAP49354 379 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 CLCNKBP51801 687 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 GSCP56915 257 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 FAM193AP78312 1265 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 CBX1P83916 185 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 PLCB3Q01970 1234 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SOX4Q06945 474 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 PDE4CQ08493 712 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 TUSC3Q13454 348 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SNX1Q13596 522 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 KRT81Q14533 505 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 DSC3Q14574 896 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SKIV2LQ15477 1246 aaKnown RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 TCTN1Q2MV58 587 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 EFHC1Q5JVL4 640 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 KAZNQ674X7 775 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 AADACL2Q6P093 401 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SCYL2Q6P3W7 929 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 DCLRE1AQ6PJP8 1040 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 AGMOQ6ZNB7 445 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SYDE1Q6ZW31 735 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 TMCO2Q7Z6W1 182 aaPredicted RBP9.74□□□□□ -0.85
SS18-220ENST00000582092 ECHDC2Q86YB7 292 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 NPAS4Q8IUM7 802 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 SIX6OS1Q8N1H7 587 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 B3GALNT2Q8NCR0 500 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 FBXO22Q8NEZ5 403 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 ATL2Q8NHH9 583 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 HSFY1Q96LI6 401 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 CNPY3Q9BT09 278 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 HEMGNQ9BXL5 484 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 FUT8Q9BYC5 575 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 TRIM31Q9BZY9 425 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 DPH5Q9H2P9 285 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 VIPAS39Q9H9C1 493 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 RGS18Q9NS28 235 aa9.74□□□□□ -0.85
SS18-220ENST00000582092 ZNF446Q9NWS9 450 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms