RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OSCP1Q8WVF1 389 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 MOGAT1Q96PD6 335 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 TMEM184CQ9NVA4 438 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 CCNL1Q9UK58 526 aaPredicted RBP4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 SNX14Q9Y5W7 946 aa4.36□□□□□ -1.71
SMCHD1-206ENST00000581631 ALG1L2C9J202 215 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 AP4M1O00189 453 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 PSG1P11464 419 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 PTPN21Q16825 1174 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 PNMA8AQ86V59 439 aaPredicted RBP4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 CAND1Q86VP6 1230 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 IZUMO1Q8IYV9 350 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 MIER2Q8N344 545 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 PCSK9Q8NBP7 692 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 OSR1Q8TAX0 266 aaPredicted RBP4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 BRIX1Q8TDN6 353 aaKnown RBP4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 ZBTB40Q9NUA8 1239 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 WASHC2CQ9Y4E1 1318 aa4.35□□□□□ -1.71
SMCHD1-206ENST00000581631 FGF2P09038 288 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 APEHP13798 732 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 TNFRSF1BP20333 461 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 KCNA3P22001 575 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 KCNJ5P48544 419 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 DGKEP52429 567 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 WNT3P56703 355 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 PTPROQ16827 1216 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 AMOTQ4VCS5 1084 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 AWAT1Q58HT5 328 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 LIX1LQ8IVB5 337 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 ZCRB1Q8TBF4 217 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 WIPF2Q8TF74 440 aaPredicted RBP4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 CTHRC1Q96CG8 243 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 GPATCH3Q96I76 525 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 ZFYVE19Q96K21 471 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 PUS7Q96PZ0 661 aaKnown RBP4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 ASPSCR1Q9BZE9 553 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 HIPK2Q9H2X6 1198 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 POT1Q9NUX5 634 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 MED16Q9Y2X0 877 aa4.34□□□□□ -1.71
SMCHD1-206ENST00000581631 TRIP12Q14669 1992 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 ANKRD62A6NC57 917 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 DTNBO60941 627 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 MT-CO3P00414 261 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 POU2F2P09086 479 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 CYP19A1P11511 503 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 ID2Q02363 134 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 ZNF91Q05481 1191 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 LARS2Q15031 903 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 GAS2L3Q86XJ1 694 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 ARFGAP1Q8N6T3 406 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 SLC35A4Q96G79 324 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 DPCDQ9BVM2 203 aaPredicted RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 GAR1Q9NY12 217 aaKnown RBP4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 AMFRQ9UKV5 643 aa4.33□□□□□ -1.72
SMCHD1-206ENST00000581631 PMPCBO75439 489 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 CRYABP02511 175 aaKnown RBP4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 CTSAP10619 480 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 CYP2C9P11712 490 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 CCND1P24385 295 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 GKP32189 559 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 SLC11A2P49281 568 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 UCP3P55916 312 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 LMAN2Q12907 356 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 MRGPRX1Q96LB2 322 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 CCDC17Q96LX7 622 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 HOMER2Q9NSB8 354 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 TFCP2L1Q9NZI6 479 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 PROCRQ9UNN8 238 aa4.32□□□□□ -1.72
SMCHD1-206ENST00000581631 B4DGG1 531 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 PRSS44E7EML9 344 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 H3BNX3 289 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 KRT86O43790 486 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 GCATO75600 419 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 MT3P25713 68 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 KRT81Q14533 505 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 BRDTQ58F21 947 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 Q6ZTC4 211 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 C18orf65Q6ZTR6 163 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 FAM177A1Q8N128 213 aaPredicted RBP4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 SIRT6Q8N6T7 355 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 PLBD2Q8NHP8 589 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 FAM234AQ9H0X4 552 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 TRMT13Q9NUP7 481 aaKnown RBP4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 PI4KBQ9UBF8 816 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 ZNF112Q9UJU3 913 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 PCDHA6Q9UN73 950 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 HS3ST3B1Q9Y662 390 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 SQORQ9Y6N5 450 aa4.31□□□□□ -1.72
SMCHD1-206ENST00000581631 A0A087WWL8 130 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 H3BUI4 141 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 M0R3H8 397 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 IBSPP21815 317 aaPredicted RBP4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 ME1P48163 572 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 PGS1Q32NB8 556 aa4.3□□□□□ -1.72
SMCHD1-206ENST00000581631 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms