RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 EIF2DP41214 584 aaKnown RBP10.61□□□□□ -0.71
RFFL-208ENST00000581039 TNFRSF4P43489 277 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 WNT7BP56706 349 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 USP46P62068 366 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 CYP27A1Q02318 531 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 RPL6Q02878 288 aaKnown RBP10.61□□□□□ -0.71
RFFL-208ENST00000581039 RESTQ13127 1097 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 HNRNPDQ14103 355 aaKnown RBP10.61□□□□□ -0.71
RFFL-208ENST00000581039 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 RHBDF2Q6PJF5 856 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 RABEPKQ7Z6M1 372 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 SFTPA1Q8IWL2 248 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 BRSK2Q8IWQ3 736 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 SYCP3Q8IZU3 236 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 CHCHD4Q8N4Q1 142 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 DEFB119Q8N690 84 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 NOC3LQ8WTT2 800 aaKnown RBP10.61□□□□□ -0.71
RFFL-208ENST00000581039 MYLPFQ96A32 169 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 RNF38Q9H0F5 515 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 SMPD4Q9NXE4 827 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 CFAP97Q9P2B7 532 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 CPQQ9Y646 472 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 PCNX2A6NKB5 2137 aa10.61□□□□□ -0.71
RFFL-208ENST00000581039 TCHHQ07283 1943 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 AKAP13Q12802 2813 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 CACNA1EQ15878 2313 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 GOLGA8IPA6NC78 632 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TBC1D3BA6NDS4 549 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 GOLGA8JA6NMD2 632 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 SCAMP3O14828 347 aaKnown RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 TRIM66O15016 1216 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 ADAM23O75077 832 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 PPP1R37O75864 691 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 BMP15O95972 392 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 PDGFRBP09619 1106 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TMEM191BP0C7N4 346 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 ADH5P11766 374 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 GAP43P17677 238 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 GARTP22102 1010 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 KIR2DL1P43626 348 aaPredicted RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 PSMC1P62191 440 aaKnown RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 KDSRQ06136 332 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 KCNA1Q09470 495 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 MESP2Q0VG99 397 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 ZNF423Q2M1K9 1284 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 PREPLQ4J6C6 727 aaPredicted RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 PEAR1Q5VY43 1037 aaPredicted RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 TDRD10Q5VZ19 366 aaKnown RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 BTBD8Q5XKL5 378 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 SLC36A4Q6YBV0 504 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TRMT11Q7Z4G4 463 aaKnown RBP10.6□□□□□ -0.71
RFFL-208ENST00000581039 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
RFFL-208ENST00000581039 ZSWIM2Q8NEG5 633 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 HPDLQ96IR7 371 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 FAM84AQ96KN4 292 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 STRA6Q9BX79 667 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 ZDHHC4Q9NPG8 344 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 CRTAC1Q9NQ79 661 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 FSCN3Q9NQT6 498 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TBC1D14Q9P2M4 693 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 SEL1LQ9UBV2 794 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 SIX4Q9UIU6 781 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
RFFL-208ENST00000581039 TAF4O00268 1085 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 GCNT3O95395 438 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 OLFM2O95897 454 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 TNNC2P02585 160 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 SYPP08247 313 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 MBL2P11226 248 aaPredicted RBP10.59□□□□□ -0.71
RFFL-208ENST00000581039 FAM193AP78312 1265 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 NOP14P78316 857 aaKnown RBP10.59□□□□□ -0.71
RFFL-208ENST00000581039 GAD2Q05329 585 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 GRIN1Q05586 938 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 ZNF33AQ06730 810 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 TAF10Q12962 218 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 HS2ST1Q7LGA3 356 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 C12orf40Q86WS4 652 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 PROSER1Q86XN7 944 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 MINDY1Q8N5J2 469 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 MYCBPAPQ8TBZ2 947 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 KBTBD7Q8WVZ9 684 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 PCED1BQ96HM7 432 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 ANKRD36BP1Q96IX9 119 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 C8orf48Q96LL4 319 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 SLITRK1Q96PX8 696 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 MMS19Q96T76 1030 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 TTLL2Q9BWV7 592 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 MTMR12Q9C0I1 747 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 PCIF1Q9H4Z3 704 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 PCDHB9Q9Y5E1 797 aa10.59□□□□□ -0.71
RFFL-208ENST00000581039 OBSL1O75147 1896 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms