RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 TMOD4Q9NZQ9 345 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 MTRRQ9UBK8 725 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CLIP2Q9UDT6 1046 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 HERC5Q9UII4 1024 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 APOBEC2Q9Y235 224 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 SIK3Q9Y2K2 1263 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 ANGPTL3Q9Y5C1 460 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 NOX1Q9Y5S8 564 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 ERC2O15083 957 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 GFPT2O94808 682 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 ATP5JP18859 108 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 FGFR4P22455 802 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 SLC6A2P23975 617 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 ALDH1A3P47895 512 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 AK2P54819 239 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 CXADRP78310 365 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 CCDC173Q0VFZ6 552 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 STRN3Q13033 797 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 G3BP1Q13283 466 aaKnown RBP eCLIP4.43□□□□□ -1.72e-7■□□□□ 11.2
SMG8-205ENST00000580798 TRIM14Q14142 442 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 EIF4A2Q14240 407 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 ODF2Q5BJF6 829 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 HECTD3Q5T447 861 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 INTS11Q5TA45 600 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 CYP26C1Q6V0L0 522 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 GALNT5Q7Z7M9 940 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 SRLQ86TD4 932 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 NLRP14Q86W24 1093 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 NKAPQ8N5F7 415 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 LSMEM1Q8N8F7 131 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 ANKRD49Q8WVL7 239 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 STON2Q8WXE9 905 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 HOXB13Q92826 284 aaPredicted RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 SNX21Q969T3 373 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 GCC1Q96CN9 775 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 RSRC1Q96IZ7 334 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 FAM81BQ96LP2 452 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 TTC1Q99614 292 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 SLC26A6Q9BXS9 759 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 TEX13AQ9BXU3 409 aaPredicted RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 RHOBTB2Q9BYZ6 727 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 REXO4Q9GZR2 422 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 LDAHQ9H6V9 325 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 DDX21Q9NR30 783 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMG8-205ENST00000580798 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 ATP8A2Q9NTI2 1148 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 PIH1D1Q9NWS0 290 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 MKS1Q9NXB0 559 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 SAGE1Q9NXZ1 904 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 SLC5A4Q9NY91 659 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 CFDP1Q9UEE9 299 aaPredicted RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 SCOCQ9UIL1 159 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 BLOC1S6Q9UL45 172 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 PHTF1Q9UMS5 762 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 TMX2Q9Y320 296 aa4.43□□□□□ -1.7
SMG8-205ENST00000580798 MRPL11Q9Y3B7 192 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 LRRFIP2Q9Y608 721 aaKnown RBP4.43□□□□□ -1.7
SMG8-205ENST00000580798 AATKQ6ZMQ8 1374 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 GOLGA6L10A0A0M3HER8 536 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 FSD2A1L4K1 749 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 B4DLN1 442 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 APAF1O14727 1248 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 PRPF3O43395 683 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 ZEB2O60315 1214 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 NEMFO60524 1076 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 TBCAO75347 108 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 PRSS23O95084 383 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 CELA2AP08217 269 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 HSPA5P11021 654 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 IL2RBP14784 551 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 CAPN3P20807 821 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 GUCY1A2P33402 732 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 KRT9P35527 623 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 USP8P40818 1118 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 HSD11B2P80365 405 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 MECOMQ03112 1051 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 MTMR1Q13613 665 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 TAF7Q15545 349 aaPredicted RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 ARHGAP29Q52LW3 1261 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 CCDC122Q5T0U0 273 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 RTL10Q7L3V2 364 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 BEND5Q7L4P6 421 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 CCDC91Q7Z6B0 441 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 STRA8Q7Z7C7 330 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 ANKRD18AQ8IVF6 992 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 PQLC1Q8N2U9 271 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 PDPRQ8NCN5 879 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 DDB2Q92466 427 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 ZBTB9Q96C00 473 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 SEC62Q99442 399 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 ACE2Q9BYF1 805 aaPredicted RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 LMAN2LQ9H0V9 348 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 GREM2Q9H772 168 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 ZCCHC17Q9NP64 241 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 PAPOLBQ9NRJ5 636 aaKnown RBP4.42□□□□□ -1.7
SMG8-205ENST00000580798 LANCL2Q9NS86 450 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 ANKEF1Q9NU02 776 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 TBCCD1Q9NVR7 557 aa4.42□□□□□ -1.7
SMG8-205ENST00000580798 FBXO34Q9NWN3 711 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms