RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 DDR2Q16832 855 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 KLHL40Q2TBA0 621 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-210ENST00000580713 PEAR1Q5VY43 1037 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-210ENST00000580713 WSCD1Q658N2 575 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 JADE1Q6IE81 842 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 SLC36A4Q6YBV0 504 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 NAXDQ8IW45 347 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 FSIP1Q8NA03 581 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 IL17RCQ8NAC3 791 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 SNX29Q8TEQ0 813 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 CLIC6Q96NY7 704 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 PNMA5Q96PV4 448 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 SLC22A12Q96S37 553 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 HAPLN2Q9GZV7 340 aa11.52□□□□□ -0.57
TOP3A-210ENST00000580713 DNAAF2Q9NVR5 837 aaKnown RBP11.52□□□□□ -0.57
TOP3A-210ENST00000580713 MYO16Q9Y6X6 1858 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 VWA3AA6NCI4 1184 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 TADA3O75528 432 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 APODP05090 189 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 MAPTP10636 758 aaKnown RBP11.51□□□□□ -0.57
TOP3A-210ENST00000580713 HDCP19113 662 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 LIG4P49917 911 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 RPL10AP62906 217 aaKnown RBP11.51□□□□□ -0.57
TOP3A-210ENST00000580713 MAPK7Q13164 816 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 SLC14A1Q13336 389 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 TMEM132DQ14C87 1099 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 PLEKHG6Q3KR16 790 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 EMC10Q5UCC4 262 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 RINT1Q6NUQ1 792 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 DTHD1Q6ZMT9 781 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 SFTPA1Q8IWL2 248 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 RGL4Q8IZJ4 473 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 TMEM161BQ8NDZ6 487 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 SPATA18Q8TC71 538 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 TSPAN18Q96SJ8 248 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 PNKPQ96T60 521 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 ZDHHC4Q9NPG8 344 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 TMLHEQ9NVH6 421 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 CACNA2D2Q9NY47 1150 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 KCNG1Q9UIX4 513 aa11.51□□□□□ -0.57
TOP3A-210ENST00000580713 C2orf78A6NCI8 922 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 PIRO00625 290 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 OGTO15294 1046 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 KAT7O95251 611 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 NFICP08651 508 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 PLS3P13797 630 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 CMA1P23946 247 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 LONP1P36776 959 aaKnown RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 SLC6A11P48066 632 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 TAF6P49848 677 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 GRIN1Q05586 938 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 CYP4F3Q08477 520 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 NFE2Q16621 373 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 HSF5Q4G112 596 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 TOGARAM2Q6ZUX3 1019 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 C1orf186Q6ZWK4 172 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 SLCO6A1Q86UG4 719 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 CD302Q8IX05 232 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 LRRC15Q8TF66 581 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 SPIRE2Q8WWL2 714 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 CRELD1Q96HD1 420 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 UBL7Q96S82 380 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 EPAS1Q99814 870 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 NTPCRQ9BSD7 190 aaKnown RBP11.5□□□□□ -0.57
TOP3A-210ENST00000580713 KIAA1549LQ6ZVL6 1849 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 BPTFQ12830 3046 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
TOP3A-210ENST00000580713 PTPRDP23468 1912 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 A0A1B0GVL5 298 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 NOL4O94818 638 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 CYP17A1P05093 508 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 CYP2F1P24903 491 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 KDSRQ06136 332 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 ZRSR1Q15695 479 aaKnown RBP11.49□□□□□ -0.57
TOP3A-210ENST00000580713 IL17AQ16552 155 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 KRT79Q5XKE5 535 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 SHC4Q6S5L8 630 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 SCN4BQ8IWT1 228 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 TRIML1Q8N9V2 468 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 SETD7Q8WTS6 366 aaKnown RBP11.49□□□□□ -0.57
TOP3A-210ENST00000580713 TRMT2BQ96GJ1 504 aaKnown RBP11.49□□□□□ -0.57
TOP3A-210ENST00000580713 HSPA12BQ96MM6 686 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 MSTO1Q9BUK6 570 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 TIPINQ9BVW5 301 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 GOLPH3LQ9H4A5 285 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 FAM13BQ9NYF5 915 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 GCNT4Q9P109 453 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
TOP3A-210ENST00000580713 TNRC6BQ9UPQ9 1833 aaKnown RBP11.49□□□□□ -0.57
TOP3A-210ENST00000580713 MAST4O15021 2626 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
TOP3A-210ENST00000580713 H0YCG3 227 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms