RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 MYOGP15173 224 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DNAJB2P25686 324 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 OR1D2P34982 312 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 BMPR1AP36894 532 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SLC6A3Q01959 620 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SMARCB1Q12824 385 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PTPROQ16827 1216 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FAM109BQ6ICB4 259 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SLC8B1Q6J4K2 584 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RNF19BQ6ZMZ0 732 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ZDHHC17Q8IUH5 632 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SCN4BQ8IWT1 228 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 UBE2OQ9C0C9 1292 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RWDD3Q9Y3V2 267 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MTMR11A4FU01 709 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 HHLA1C9JL84 531 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NCK2O43639 380 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TKTL1P51854 596 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FAM193AP78312 1265 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ROR1Q01973 937 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MEI1Q5TIA1 1274 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 VSTM1Q6UX27 236 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GPRIN1Q7Z2K8 1008 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SIX6OS1Q8N1H7 587 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 JOSD2Q8TAC2 188 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CLEC4CQ8WTT0 213 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 AUTS2Q8WXX7 1259 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PIWIL1Q96J94 861 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CLSTN3Q9BQT9 956 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ABCB6Q9NP58 842 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MRPL17Q9NRX2 175 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 HYOU1Q9Y4L1 999 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ALG6Q9Y672 507 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RFC1P35251 1148 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MAGEA11P43364 429 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NDUFV1P49821 464 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RNASE9P60153 205 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RAB41Q5JT25 222 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NT5DC3Q86UY8 548 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TTC9BQ8N6N2 239 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SPPL2BQ8TCT7 592 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 C2orf15Q8WU43 125 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 C17orf80Q9BSJ5 609 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PLVAPQ9BX97 442 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ZBP1Q9H171 429 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PNPLA8Q9NP80 782 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 IP6K2Q9UHH9 426 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PACSIN2Q9UNF0 486 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TRIM66O15016 1216 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GRAP2O75791 330 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 URI1O94763 535 aaPredicted RBP14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PROSCO94903 275 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FBXO21O94952 628 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ARHGEF15O94989 841 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 VNN2O95498 520 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CA3P07451 260 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CTSAP10619 480 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 COMTP21964 271 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CA8P35219 290 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ADCY1Q08828 1119 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TAF5Q15542 800 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GPR65Q8IYL9 337 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 EMC1Q8N766 993 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NDRG1Q92597 394 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GDF15Q99988 308 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TLR10Q9BXR5 811 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ULBP1Q9BZM6 244 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ALG13Q9NP73 1137 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LCMT1Q9UIC8 334 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TMEM59LQ9UK28 342 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
CDK5RAP3-219ENST00000580670 H0YGN5 161 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SPOPO43791 374 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SCNN1AP37088 669 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GPR15P49685 360 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DNA2P51530 1060 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 OGDHQ02218 1023 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CREMQ03060 361 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DUSP4Q13115 394 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DDR2Q16832 855 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MGAT5BQ3V5L5 792 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PAPD7Q5XG87 772 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SPRED2Q7Z698 418 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CPNE8Q86YQ8 564 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 C8orf48Q96LL4 319 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SEPT5Q99719 369 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PLXNA4Q9HCM2 1894 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CNGB3Q9NQW8 809 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MTUS1Q9ULD2 1270 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SSX2IPQ9Y2D8 614 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PCDHA11Q9Y5I1 949 aa14.53□□□□□ -0.08
CDK5RAP3-219ENST00000580670 USP17L7P0C7H9 530 aa14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 HAPLN1P10915 354 aaPredicted RBP14.52□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PSMA2P25787 234 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms