RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 TRIM6Q9C030 488 aaPredicted RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 CCDC113Q9H0I3 377 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 DEFB129Q9H1M3 183 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 CDC42EP4Q9H3Q1 356 aaKnown RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 SEMA4AQ9H3S1 761 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 ECT2Q9H8V3 914 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 UBE2TQ9NPD8 197 aaPredicted RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 ARHGEF3Q9NR81 526 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 TMOD4Q9NZQ9 345 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 KLHL14Q9P2G3 628 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 CTNNAL1Q9UBT7 734 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 ASIC3Q9UHC3 531 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 KCNG1Q9UIX4 513 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 DCTN4Q9UJW0 460 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 NOCTQ9UK39 431 aaKnown RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 PPM1HQ9ULR3 514 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 SMG5Q9UPR3 1016 aaKnown RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 MRPL11Q9Y3B7 192 aaKnown RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 COL11A2P13942 1736 aaPredicted RBP5.62□□□□□ -1.51
CDH8-206ENST00000580044 WDR81Q562E7 1941 aa5.62□□□□□ -1.51
CDH8-206ENST00000580044 SMIM23A6NLE4 172 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 TCP11X1B4DZS4 312 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 CLGNO14967 610 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ATP2A1O14983 1001 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 PRPF4O43172 522 aaKnown RBP eCLIP5.61□□□□□ -1.51
CDH8-206ENST00000580044 PSTPIP1O43586 416 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 PLA2G6O60733 806 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ATP2C2O75185 946 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LRRN2O75325 713 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LRIG2O94898 1065 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 UBOX5O94941 541 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LYPLA2O95372 231 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LMNAP02545 664 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 SERPINB2P05120 415 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 P4HBP07237 508 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 PYGMP11217 842 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 PLS3P13797 630 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 BRAFP15056 766 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 NPR1P16066 1061 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ATP2A2P16615 1042 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 FGFR4P22455 802 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ALDH1B1P30837 517 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 MSH2P43246 934 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 CRKP46108 304 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 IFNAR2P48551 515 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 NCALDP61601 193 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 IRX1P78414 480 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 KCNA1Q09470 495 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 RASA2Q15283 850 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 E2F5Q15329 346 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 SIX1Q15475 284 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 ZRSR2Q15696 482 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 PTPROQ16827 1216 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 USH1GQ495M9 461 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.61□□□□□ -1.51
CDH8-206ENST00000580044 ZC2HC1CQ53FD0 456 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 FAM133BQ5BKY9 247 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 SFRP5Q5T4F7 317 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 NUGGCQ68CJ6 796 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 KRT39Q6A163 491 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ACAD10Q6JQN1 1059 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 APOBEC3HQ6NTF7 200 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 CCDC174Q6PII3 467 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 RHBDF2Q6PJF5 856 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ZNF365Q70YC5 407 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ASRGL1Q7L266 308 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ADAT2Q7Z6V5 191 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 TBC1D1Q86TI0 1168 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 NOP9Q86U38 636 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 CCDC25Q86WR0 208 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 C12orf40Q86WS4 652 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 WFDC3Q8IUB2 231 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 ATL2Q8NHH9 583 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 ZNF398Q8TD17 642 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 CHURC1Q8WUH1 139 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 SHC3Q92529 594 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 KRT35Q92764 455 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 INPP5DQ92835 1189 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 CFAP57Q96MR6 1250 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 NT5C1BQ96P26 610 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 GPR101Q96P66 508 aaPredicted RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 TMEM237Q96Q45 408 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 TGS1Q96RS0 853 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 LXNQ9BS40 222 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 TUBB6Q9BUF5 446 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 DNAJC18Q9H819 358 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 C17orf75Q9HAS0 396 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 TMEM8AQ9HCN3 771 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 MRPL47Q9HD33 250 aaKnown RBP5.61□□□□□ -1.51
CDH8-206ENST00000580044 PRDM7Q9NQW5 492 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 FGFR1OP2Q9NVK5 253 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 TAS2R14Q9NYV8 317 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 RGL1Q9NZL6 768 aa5.61□□□□□ -1.51
CDH8-206ENST00000580044 PRKAG3Q9UGI9 489 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms