RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PPP1R26Q5T8A7 1209 aaPredicted RBP25.33■■□□□ 1.65
LIMD2-207ENST00000579329 PHLDB3Q6NSJ2 640 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 CLEC20AQ6ZU45 233 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 PPM1KQ8N3J5 372 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 UBR7Q8N806 425 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 PDZD8Q8NEN9 1154 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 OVCA2Q8WZ82 227 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 USP13Q92995 863 aaPredicted RBP25.33■■□□□ 1.65
LIMD2-207ENST00000579329 FBXO32Q969P5 355 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 INTS2Q9H0H0 1204 aaKnown RBP25.33■■□□□ 1.65
LIMD2-207ENST00000579329 TRPV5Q9NQA5 729 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 TDP1Q9NUW8 608 aa25.33■■□□□ 1.65
LIMD2-207ENST00000579329 ZNF840PA6NDX5 716 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 STK25O00506 426 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 CKMP06732 381 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 STARD6P59095 220 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 ARHGAP29Q52LW3 1261 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 ARHGAP17Q68EM7 881 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 LRRC3BQ96PB8 259 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 PNPLA8Q9NP80 782 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 THG1LQ9NWX6 298 aaKnown RBP25.32■■□□□ 1.64
LIMD2-207ENST00000579329 IL37Q9NZH6 218 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 GCNT4Q9P109 453 aa25.32■■□□□ 1.64
LIMD2-207ENST00000579329 PTPRZ1P23471 2315 aaPredicted RBP25.31■■□□□ 1.64
LIMD2-207ENST00000579329 C2orf78A6NCI8 922 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 AOC1P19801 751 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 GCNT1Q02742 428 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 SASS6Q6UVJ0 657 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 ARL14EPQ8N8R7 260 aaPredicted RBP25.31■■□□□ 1.64
LIMD2-207ENST00000579329 SCAMP5Q8TAC9 235 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 ATOH1Q92858 354 aaPredicted RBP25.31■■□□□ 1.64
LIMD2-207ENST00000579329 DUSP16Q9BY84 665 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 CCL26Q9Y258 94 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 ANAPC1Q9H1A4 1944 aa25.31■■□□□ 1.64
LIMD2-207ENST00000579329 ZNF638Q14966 1978 aaKnown RBP25.31■■□□□ 1.64
LIMD2-207ENST00000579329 HDCP19113 662 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 PLCB2Q00722 1185 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 MAN2A1Q16706 1144 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 TPRG1Q6ZUI0 275 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 ARHGEF19Q8IW93 802 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 TMEM105Q8N8V8 129 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 CSGALNACT1Q8TDX6 532 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 JAKMIP2Q96AA8 810 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 SLC22A12Q96S37 553 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 CYP2S1Q96SQ9 504 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 FBXO44Q9H4M3 255 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 HEBP1Q9NRV9 189 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 PATJQ8NI35 1801 aa25.3■■□□□ 1.64
LIMD2-207ENST00000579329 FAM92AA1XBS5 289 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 ARNTLO00327 626 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 ABL1P00519 1130 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 SGO2Q562F6 1265 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 TMEM270Q6UE05 265 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 KAT5Q92993 513 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 DDX23Q9BUQ8 820 aaKnown RBP25.29■■□□□ 1.64
LIMD2-207ENST00000579329 ANO10Q9NW15 660 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 PCDHB4Q9Y5E5 795 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 MYH10P35580 1976 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 COL4A2P08572 1712 aa25.29■■□□□ 1.64
LIMD2-207ENST00000579329 RIF1Q5UIP0 2472 aaKnown RBP25.28■■□□□ 1.64
LIMD2-207ENST00000579329 DMDP11532 3685 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 KANSL1LA0AUZ9 987 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 HHLA1C9JL84 531 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 CD19P15391 556 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 ACO1P21399 889 aaKnown RBP25.28■■□□□ 1.64
LIMD2-207ENST00000579329 NUBP1P53384 320 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 USP4Q13107 963 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 GBP6Q6ZN66 633 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 RRAGAQ7L523 313 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 ENOX1Q8TC92 643 aaKnown RBP25.28■■□□□ 1.64
LIMD2-207ENST00000579329 KIAA1257Q9ULG3 409 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 ARHGAP26Q9UNA1 814 aa25.28■■□□□ 1.64
LIMD2-207ENST00000579329 GTPBP10A4D1E9 387 aaKnown RBP25.27■■□□□ 1.64
LIMD2-207ENST00000579329 H0Y858 1186 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 OLFM2O95897 454 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 OAS1P00973 400 aaKnown RBP25.27■■□□□ 1.64
LIMD2-207ENST00000579329 PAEPP09466 180 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 VDRP11473 427 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 SLC8A3P57103 927 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 STX1AQ16623 288 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 GOLGA7BQ2TAP0 167 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 CC2D1AQ6P1N0 951 aaPredicted RBP25.27■■□□□ 1.64
LIMD2-207ENST00000579329 GPRIN1Q7Z2K8 1008 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 ANKRD52Q8NB46 1076 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 ZFYVE19Q96K21 471 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 CRACR2AQ9BSW2 395 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 IRF2BPLQ9H1B7 796 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 GMIPQ9P107 970 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 NFE2L3Q9Y4A8 694 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 KIF26AQ9ULI4 1882 aaPredicted RBP25.27■■□□□ 1.64
LIMD2-207ENST00000579329 TICRRQ7Z2Z1 1910 aa25.27■■□□□ 1.64
LIMD2-207ENST00000579329 KCNJ18B7U540 433 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 MAN2B1O00754 1011 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 PI15O43692 258 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 ZDHHC11BP0C7U3 371 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 PRKCSHP14314 528 aaPredicted RBP25.26■■□□□ 1.63
LIMD2-207ENST00000579329 GLULP15104 373 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 TCF3P15923 654 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 SLC7A9P82251 487 aa25.26■■□□□ 1.63
LIMD2-207ENST00000579329 KCNJ12Q14500 433 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms