RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 OLIG1Q8TAK6 271 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 HPS3Q969F9 1004 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 PNKPQ96T60 521 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 ELOVL4Q9GZR5 314 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 PTPRDP23468 1912 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 ANTXRLA6NF34 631 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 CST3P01034 146 aaPredicted RBP20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 BCKDHBP21953 392 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 TAF10Q12962 218 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 SNRNP35Q16560 246 aaKnown RBP20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 DDX42Q86XP3 938 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 ZNF507Q8TCN5 953 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 SLITRK1Q96PX8 696 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 TRIM9Q9C026 710 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 TMEM9BQ9NQ34 198 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 KBTBD4Q9NVX7 518 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 SMPD4Q9NXE4 827 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 NME7Q9Y5B8 376 aa20.45■□□□□ 0.86
CDKN2A-213ENST00000579122 A0A0A0MRY4 1105 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 ABL1P00519 1130 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 APODP05090 189 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 DLATP10515 647 aaKnown RBP20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 PTPN1P18031 435 aaKnown RBP20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 TNNI1P19237 187 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 SLC6A11P48066 632 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 NASPP49321 788 aaPredicted RBP20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 TNNC1P63316 161 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 PSMD6Q15008 389 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 RHBDF2Q6PJF5 856 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 TMEM92Q6UXU6 159 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 EPM2AIP1Q7L775 607 aaPredicted RBP20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 ALLCQ8N6M5 410 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 IL17RCQ8NAC3 791 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 OR6B3Q8NGW1 331 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 FNBP1Q96RU3 617 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 CGRRF1Q99675 332 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 ZSCAN16Q9H4T2 348 aaPredicted RBP20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 AGPAT3Q9NRZ7 376 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 CFAP97Q9P2B7 532 aa20.44■□□□□ 0.86
CDKN2A-213ENST00000579122 GIPC1O14908 333 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 KAT7O95251 611 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 STAU1O95793 577 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 ADH1CP00326 375 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 PROS1P07225 676 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 CHRM1P11229 460 aaPredicted RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 HNRNPLP14866 589 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 CSRP1P21291 193 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 DHPSP49366 369 aaPredicted RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 CACNA2D1P54289 1103 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 SNRPFP62306 86 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 AMPD3Q01432 767 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 E2F4Q16254 413 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 WDR72Q3MJ13 1102 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 SH3PXD2AQ5TCZ1 1133 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 HSCBQ8IWL3 235 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 RDH13Q8NBN7 331 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 TXNDC5Q8NBS9 432 aaKnown RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 PDZD8Q8NEN9 1154 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 OVCA2Q8WZ82 227 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 ZNF518BQ9C0D4 1074 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 DPEP3Q9H4B8 488 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 POLMQ9NP87 494 aaPredicted RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 TMEM30AQ9NV96 361 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 TBC1D14Q9P2M4 693 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 EVLQ9UI08 416 aaPredicted RBP20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 MTMR6Q9Y217 621 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 NUP205Q92621 2012 aa20.43■□□□□ 0.86
CDKN2A-213ENST00000579122 E2F8A0AVK6 867 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 A8MXQ7 604 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 PATE3B3GLJ2 98 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 SGK1O00141 431 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 CDX4O14627 284 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 TGFB1I1O43294 461 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 RTN3O95197 1032 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 KLF8O95600 359 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 MBL2P11226 248 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 ADH5P11766 374 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 CEACAM1P13688 526 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 YWHAQP27348 245 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 TIE1P35590 1138 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 P2RY2P41231 377 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 GRIA2P42262 883 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 TNFRSF4P43489 277 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 CYP24A1Q07973 514 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 ZNF252P-AS1Q0IIN9 211 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 MESP2Q0VG99 397 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 BECN1Q14457 450 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 EOGTQ5NDL2 527 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 CNNM4Q6P4Q7 775 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 C12orf40Q86WS4 652 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 SFTPA1Q8IWL2 248 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 NUP93Q8N1F7 819 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 WHAMMQ8TF30 809 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 SPACA7Q96KW9 195 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 B3GNT5Q9BYG0 378 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 ARHGEF4Q9NR80 690 aa20.42■□□□□ 0.86
CDKN2A-213ENST00000579122 UBE4BO95155 1302 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms